Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0446 ATGATGACAACAATGGAAGAGAGTCCACGGAGTCCAGAGGCTAAGATAGGAATGAGAGTAGAGGATCTATGGGATATTCAAGAGCCACAGCTAAGTCCTAATGACAAACTCAATGCTTGCTTTGAAAGCATCCCTGTCTCTGCTTTCCCTCTACCTCCTTCTAACCAAGAAATTGAGATAAAATCGGATGCCACCCTTGCTGAGGCTGTTAAAATACTGGCAAAGCATAACATTCTCAGTGCACCTGTGGTGGATGTGGATGCACCTGAAGATGCTAGTTGGATTGACAGATATATAGGAGTAGTTGAGTTTGCCGGAATTGCCGTATGGATTCTGCATCAGTCTGAACCTACATCTCCGAAGAGTCCATCCAGTGGAACTGTTATTGCAGCTGCGGCTAACAGAATGACTTCTGCGTTAGAACTCGACCCCTTAGACCTTGGATCTGCTGCAACAGCTTCAGGAAACTTTTTCGAGGATCTGATTTCTTCTGACCTTTATAAGAATACCAAGGTTCGTGATATTTCAGGGTCATTCCGTTGGGCTCCCTTTCTTGCTTTGGAAAGATCAAACTCATTTTTAACCATGTTGTTGCTGCTTTCGAAGTACAAGATGAAGAGTGTTCCTGTTGTGGACTTGGGTGCAGGTAGAATTGATAACATTATTACACAGCCTGCTGTAATTCACATGTTGGCAGAATGTTCTGGTCTTCAGTGGTTCGAGAGTTGGGGAGACAAGAAACTATCCGAAGTTGGTCTTCCACTGGTGACACCAAGTCAAATCATCAAGGTTTATGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAACAGAGGATTGGTGGGGTGCCTGTGATCCAAAGGGGTGGCAGCAAGGCAGTGGGTAATATAAGTCTGCAGGATGTTCAATTCTTGCTAACAGCTCCGGAAATCTACCATGATTACAGAGCTATTACAGTAAAAGACTTCTTGACCGTCGTTCCAACGACAAGTGACTTGAGTACATGCAAAAAGGACTGCACAGTCAAAGAATTGATTCAATTGCTCGACCACAAGAAGATTCTTCGGGTTTACGTCGTGGATGACGACGGGAATCTGGAAGGATTGATAACACTCAGAGATATCATCTCAAGGTTAGTACATGAACCCCATGGCTATTTCGGGGACTTCTTTGATGGTGTTCTCCCCCTGCCTCCAAACAGCAGGGTCTAA 1218 0.445 MMTTMEESPRSPEAKIGMRVEDLWDIQEPQLSPNDKLNACFESIPVSAFPLPPSNQEIEIKSDATLAEAVKILAKHNILSAPVVDVDAPEDASWIDRYIGVVEFAGIAVWILHQSEPTSPKSPSSGTVIAAAANRMTSALELDPLDLGSAATASGNFFEDLISSDLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIDNIITQPAVIHMLAECSGLQWFESWGDKKLSEVGLPLVTPSQIIKVYEDEPVLQAFKLMRKQRIGGVPVIQRGGSKAVGNISLQDVQFLLTAPEIYHDYRAITVKDFLTVVPTTSDLSTCKKDCTVKELIQLLDHKKILRVYVVDDDGNLEGLITLRDIISRLVHEPHGYFGDFFDGVLPLPPNSRV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0446 405 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 405 - -
Lan15g0446 405 SMART cbs_1 260 309 IPR000644 -
Lan15g0446 405 SMART cbs_1 56 112 IPR000644 -
Lan15g0446 405 SMART cbs_1 183 232 IPR000644 -
Lan15g0446 405 SMART cbs_1 334 382 IPR000644 -
Lan15g0446 405 CDD CBS_pair_SF 197 304 - -
Lan15g0446 405 ProSiteProfiles CBS domain profile. 330 389 IPR000644 -
Lan15g0446 405 SUPERFAMILY CBS-domain pair 220 391 IPR046342 -
Lan15g0446 405 Pfam CBS domain 260 304 IPR000644 -
Lan15g0446 405 Pfam CBS domain 331 382 IPR000644 -
Lan15g0446 405 ProSiteProfiles CBS domain profile. 53 118 IPR000644 -
Lan15g0446 405 SUPERFAMILY CBS-domain pair 30 232 IPR046342 -
Lan15g0446 405 PANTHER BNAA06G16460D PROTEIN 8 405 - -
Lan15g0446 405 Gene3D - 38 237 IPR046342 -
Lan15g0446 405 Gene3D - 245 384 IPR046342 -
Lan15g0446 405 CDD CBS_pair_SF 259 378 - -
Lan15g0446 405 ProSiteProfiles CBS domain profile. 256 317 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0446 Lan-Chr15 10288034 10291706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0446 - - gmx:100776754 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1928 1 34544743 34547123 Lan15g0446 15 10288034 10291706 PCT
Lan15g0446 15 10288034 10291706 Lan1g1928 1 34544743 34547123 PCT