Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0183 ATGGCGGAGGAGTTTTCAAAAGCGGTGGAGGAAGGCCTCCGTCTCTCTAAACGAATCTACTTCGGCCGTGACAGAGCGGTGTCTCCTCCTAAACCACCGCCTTCAATGCTCAAATCCTCCACCGCTTTTCTCCCAACCGCTCCCATGGTTTACGCCGTCATTCATGACCCTGGCATCGTTGACAACCCTGACGTCCCTAGCTACCAGCCTCACGTTCACGGAAGGTGTGATCCTCCGGCACTCATTCCTCTTCATATGTCCGCCATTGATCTCAATGCTCATTGCTATTTCGATACGGCGTTTGTAACCGTTTCTGCCACGTGGAGGTTGCATTGCGTCACCGGTTGCCGGAGCTGTGACTGCCGTATCGCCATTCCTATGGGCGGAAAACAGGGTTCAATTCAAGGTGTTGAGGTTAGTGTCCATAGGAAATCTTATTCTACTCAACTGGTTGATATTGAAGACACCAGTGATAAAGAGAGTGCGATCCGTGCTCAAAATGGAGGCTTTCTCAAGCCTAATATCTTCATTTTGAATATACCTCAGATTGATGGGGGTTCCAATTTATCAGTCAAGATTACTTGGTCCCAAAAAGTACTATACTATGATGATACATTCTCATTGAATGTGCCATTCACCTTTCCTGATTTTGTCAACCCCGCCGGGAAGAGAATGTTGAGAAAAGAGAAGATACAAATAAGTGTGAATGCTGATGCTGGAAGTGAGCTTCTATGCAAGGCAATAAGTCATCCCCTAAAGGAAGTGAAGCGCAGTGCTGGGAGTATGGGTTTCTCAATTGATTCTGAAGTTATATCATGGTCAAAAGTTGATTTTAATTTTTCATATGCTGTTTCTTCAAGTCATATACATGGTGGTGTTCTTTTGAAATCTCCATCTGTGGATGATTTTGATCAAAGAGAGATGTTCTGCATGTACATTTCTCCTGGAAATCTTCAGCGTAGGAAGGTATTCAGAAAGGACATCATATTTGTTATTGACATCAGTGGTAGTATGCGAGGAAAGTTAATTGATGACACAAAGAATGCACTATCAACAGCTCTCAATAGGCTTGATCGTGATGATTCATTCAGTATTATAGCATTTAATGGAGAGAGTTATTTATTTTCGGCATCAATGGAGTTGGCTTCAAAGGATGCTGTTCAAAGGGCCATCGAGTGGATTAACATGAACTTTGTTGCTGGGGGTGATACAAATATTTTGCATCCCTTAAAAACGGCAATGGAGATGCTATCCAGTGCTCGAAATTCTATTCCAATCATTTTCCTAGTAACAGATGGAAGTGTTGAAGATGAGAGACAAATTTGTGATATGGTAAAGAATCATGTGACCAATGCAGAATCAGTATCCCCACGAATTTACACTTTTGGAATAGGTTCATTCTGCAATCATTATTTCTTGAGGATGCTTGCTGTGATTGGTAGGGGCCAACACGATGCAGCACTGGATGTAGATTTGGTTGAGCCTCAAATGCTGAGATTGTTTGACAAAGCTTCATCTCTTGTTCTTGCAAATATCACAATTGACATATTTGATGATCTGGACGAAGTTGAGGTGTACCCCTCCCTTATTCCAGAGCTCTCATCAGATGTTCCATTGACTTTATCTGGAAGATATAAGGGACGTTTTCCAGAAAATCTTAAAGTTAAAGGTGTATTGGCTGATTTCAGTAGTTTTGTAATAGATATGAAGATACAAGAAGCTAACGACATACCTGTACAAAGGATTTGTGCAAGAGATCAGATAGAGTATCTTACAGCTCAAGCATGGCTTTTAAAAAGTAAAGAATTAGAACAGAAGGTTGCGAAACTGAGTCTACAAACTGGCTTTCTGTCAGAGTATACGAGTATGGCAATTCTTGAGGATGATCAGCTAAAAAAGGAAATGTCAAAGAAGACCAAACCTCGAAAAGGAGAAAACGCCCAAGGCCAGAGAATGATCATGCTCCCAAACTTAGGCATAGGCTTTGGCAACTTGATTGCAACCGCTGAAAACACTCCACCGGGATGGGAAGAAACAAGAGGGCCTGATGGGGCTGAAATGTTTGTTAAGGCGGCCACAAATTGCTGCGGCAGCATATGCCATTACTGCTGTTGCATGTGCTGCATCCAGTGCTGTACCCGGATGAACAACCAGTGTGCGACGGCATTGACTCAGCTTTGTGTTGGCATAGGATGCTTAGGTTGCCTCAGCTGTTGTTCAGATATGTGCTGTGCAGAAAGTGAAAATTGA 2250 0.4271 MAEEFSKAVEEGLRLSKRIYFGRDRAVSPPKPPPSMLKSSTAFLPTAPMVYAVIHDPGIVDNPDVPSYQPHVHGRCDPPALIPLHMSAIDLNAHCYFDTAFVTVSATWRLHCVTGCRSCDCRIAIPMGGKQGSIQGVEVSVHRKSYSTQLVDIEDTSDKESAIRAQNGGFLKPNIFILNIPQIDGGSNLSVKITWSQKVLYYDDTFSLNVPFTFPDFVNPAGKRMLRKEKIQISVNADAGSELLCKAISHPLKEVKRSAGSMGFSIDSEVISWSKVDFNFSYAVSSSHIHGGVLLKSPSVDDFDQREMFCMYISPGNLQRRKVFRKDIIFVIDISGSMRGKLIDDTKNALSTALNRLDRDDSFSIIAFNGESYLFSASMELASKDAVQRAIEWINMNFVAGGDTNILHPLKTAMEMLSSARNSIPIIFLVTDGSVEDERQICDMVKNHVTNAESVSPRIYTFGIGSFCNHYFLRMLAVIGRGQHDAALDVDLVEPQMLRLFDKASSLVLANITIDIFDDLDEVEVYPSLIPELSSDVPLTLSGRYKGRFPENLKVKGVLADFSSFVIDMKIQEANDIPVQRICARDQIEYLTAQAWLLKSKELEQKVAKLSLQTGFLSEYTSMAILEDDQLKKEMSKKTKPRKGENAQGQRMIMLPNLGIGFGNLIATAENTPPGWEETRGPDGAEMFVKAATNCCGSICHYCCCMCCIQCCTRMNNQCATALTQLCVGIGCLGCLSCCSDMCCAESEN* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0183 749 Gene3D von Willebrand factor, type A domain 326 503 IPR036465 -
Lan15g0183 749 Pfam von Willebrand factor type A domain 327 479 IPR002035 -
Lan15g0183 749 ProSiteProfiles VWFA domain profile. 327 520 IPR002035 -
Lan15g0183 749 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 748 - -
Lan15g0183 749 CDD vWA_interalpha_trypsin_inhibitor 324 499 - -
Lan15g0183 749 SMART VWA_4 325 505 IPR002035 -
Lan15g0183 749 SUPERFAMILY vWA-like 326 489 IPR036465 -
Lan15g0183 749 Coils Coil 593 613 - -
Lan15g0183 749 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0183 Lan-Chr15 1970547 1982628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0183 - - gmx:100820133 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0963 12 16463645 16469128 Lan15g0183 15 1970547 1982628 PCT
Lan1g1307 1 22769301 22774793 Lan15g0183 15 1970547 1982628 PCT
Lan15g0183 15 1970547 1982628 Lan12g0963 12 16463645 16469128 PCT
Lan15g0183 15 1970547 1982628 Lan1g1307 1 22769301 22774793 PCT