Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0963 ATGGCTGAGGAATTCTCGAAAGCGGTTGATAACGGTCTAAAGCTATCTAAACGAATATACTTCGGGAAAGACAGGGCGGTGGCGCCGCCGAAGCAACCGGCGCCGATGGCGAAGTCACCGGGTGCCTTACTTCCAACGGCGCCGATGGTTTACGCGGTGATCGTTGATCCAGGGATAGTGGATAATCCAGATATCACGAGCTACCAGCCACACGTGTATGGAAGGTGTGACCCAGCGGCGTTGATTCCGCTTGAGATGAAAGGAATTGAGATGGAAGTTGATTGTTATTTGGAAACAGCGTTTATCACTGTTAATGGCTCTTGGAGGGTTCATTGTGTTATGGGAAGCCGTGCCTGTGATTGTCGTCTTGCTATTCCCATCACCGAACAGGGTTCCATTCTAGGTGTTGAGGTTACTGCTCCGACCAAATCGTATTCTACTCAACTGGTTGTTATGGATGACAATAATGAGAACCAAAGTGGCATCCGAGCTCAAAATGGTGGATTTCTCAAGTCCAATATACTTACTTTAACTATACCACAGATAGATGGGGGTTCCATTTTATCAATTAAAATGAGTTGGTCTCAGAAAATAGTATACCGCAATGGTCAGTTCTCTTTGAATTTGCCATTTACCTTCCCTGATTTTGTCAACCCAGCTGCGAAGAGAATATCTAGACGAGAAAAAATACAAATAAATGTGAATGCTGTTGCCGGAAGCGAGCTTCTATGCAAGACAATGAGCCATCCCCTAAAGGAAGTAAGGCGTCATGCTGGGAGTATGGGTTTCTTATATGATGCTGAAGTTCTCTCATGGTCAAAAACGGATTTTAGCTTTTCATATGCTGTTCCCTCAAGTCATATAAATGGTGTTGTGCTTTTGGAATCTGCTTCTGCGTATGATTTTGATCAAAGAGAGATGTTCCACATGTGCCTTTCTCCTGGAGATATTCAGAGTAAGGTATTCAAAAAGGACATAATATTCATTATTGACATCAGTGGTAGCATGCGGGGAAAGCTAATTGATTACACAAAAAATGCACTATCAGAGGCTCTCTCTAAGCTTAATCCTCAAGATTCATTTAGTATTATAGCCTTTAATGGAGAGAGTTATATATTTTCAAAATCAATGGAGTTGGCTTCCAAGGATTCTGTTGAAAGGGCCAATGAGTGGATTAACACCAACTTTGTTGCTGCGGGTGCTACAAACATTTCAAGTGCCTTAAACAAGGCAATAGAAATGCTATCCAGCGCTAGAAGCTCAGTTCCAATAATTTTCTTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAATTTGTGCTTTGGTAAAGAATCATATAGTCAATGGAGAGTCAATATGCCCTCGAATTTACACCTTTGGCATAGGTTCATTTTGCAATCATTACTTCTTGCGGATGCTTGCAATGATTGGCAGGGGACAATATGATGCTGCACTGGATGTAGATTTGGTTAAGCCTCAAATGCTGTCATTGTTTGACAAAGCTTCATCTCTCGTTCTTGCAAATATAAAAGTGGATATATTTGATGAGCTTGATGAATTTGAGGTTTCTGCAAGAGATCAAATAGAGTATCTTACTGCTCAAGCATGGCTTTCAGAAAATAAACAATTAGAACAGAAGGTTGCAAAACTGAGTCTGCAGACTGGCTTCATGTCTGAGTATACACGAATGATAATACTTGAGGATGATCATCTAAAGAACGTCAAGGAGTCAGCTGGAACGAAAGTCTCAAAAAATAGCCACTGTCAGTATGATGCAAATGCCCAAGGCCAGAGAGTAATTATACTCCCACACTTGGGCATTGGCTTTGGCAACTTGTCTGCAACTGCTGAAAATACTCCTCCAGGTTTTGAAATGAAATTGCCTGAAGTTGCTGAAATCTTCAAGGCAACCTCAAATTGTTGTAGCACCTTGTGCGGTTACTGTTGTTGTTTCTGCTGCATCCAGTGCTGTTCCAAGATGAACAATCAATGTGCAACTGCACTCACTCAGCTTTTCATTGCTCTAGGATGCTTAGGCTGCCTCACCTGCTGTTCAGAGATATGCTGTTCCGGAAACGATGACTGA 2088 0.4191 MAEEFSKAVDNGLKLSKRIYFGKDRAVAPPKQPAPMAKSPGALLPTAPMVYAVIVDPGIVDNPDITSYQPHVYGRCDPAALIPLEMKGIEMEVDCYLETAFITVNGSWRVHCVMGSRACDCRLAIPITEQGSILGVEVTAPTKSYSTQLVVMDDNNENQSGIRAQNGGFLKSNILTLTIPQIDGGSILSIKMSWSQKIVYRNGQFSLNLPFTFPDFVNPAAKRISRREKIQINVNAVAGSELLCKTMSHPLKEVRRHAGSMGFLYDAEVLSWSKTDFSFSYAVPSSHINGVVLLESASAYDFDQREMFHMCLSPGDIQSKVFKKDIIFIIDISGSMRGKLIDYTKNALSEALSKLNPQDSFSIIAFNGESYIFSKSMELASKDSVERANEWINTNFVAAGATNISSALNKAIEMLSSARSSVPIIFLVTDGTVEDERQICALVKNHIVNGESICPRIYTFGIGSFCNHYFLRMLAMIGRGQYDAALDVDLVKPQMLSLFDKASSLVLANIKVDIFDELDEFEVSARDQIEYLTAQAWLSENKQLEQKVAKLSLQTGFMSEYTRMIILEDDHLKNVKESAGTKVSKNSHCQYDANAQGQRVIILPHLGIGFGNLSATAENTPPGFEMKLPEVAEIFKATSNCCSTLCGYCCCFCCIQCCSKMNNQCATALTQLFIALGCLGCLTCCSEICCSGNDD* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0963 695 ProSiteProfiles VWFA domain profile. 325 518 IPR002035 -
Lan12g0963 695 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 523 - -
Lan12g0963 695 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 522 694 - -
Lan12g0963 695 SMART VWA_4 323 499 IPR002035 -
Lan12g0963 695 Coils Coil 534 554 - -
Lan12g0963 695 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 523 - -
Lan12g0963 695 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 522 694 - -
Lan12g0963 695 Gene3D von Willebrand factor, type A domain 324 500 IPR036465 -
Lan12g0963 695 SUPERFAMILY vWA-like 324 486 IPR036465 -
Lan12g0963 695 Pfam von Willebrand factor type A domain 324 482 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0963 Lan-Chr12 16463645 16469128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0963 - - ccaj:109803524 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0963 12 16463645 16469128 Lan1g1307 1 22769301 22774793 LSH
Lan12g0963 12 16463645 16469128 Lan15g0183 15 1970547 1982628 PCT
Lan15g0183 15 1970547 1982628 Lan12g0963 12 16463645 16469128 PCT