Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0143 ATGGCAACTAACAAAGATTCAAACCCATGGTCACCACTCCAAGCACCAAAAGAGCTAGCTCAAAAGCTTAGTCTTGATCCTCAAACCCTTTTACTAGCCTCATCAGATTTTGGCTTCATAGAGAATAAAACACCATTAGCAGTTTTTGAACCATCTTCTGAAAGTGATATCATAGACTTAATAAAGTACTCAAATTCTCTCCCAAACCCTTTCACTATAGCACCAAGAGGGCAAGGTCACTCAACACATGGACAAGGCTTGACAAATGATGGTGTTGTGCTGAATATGAATGGATTGGGTGATTTCAGAAATGGGTCTGAGATTGTAGTGTATGATGAATATGTTGATGTTGGTGCTGAACAACTTTGGATTGATGTGTTGCGTGCAACACTTAAGCATGGACTCACACCACTTTCTTGGACTGATTACATGTATTTATCAGTTGGTGGAACACTTTCTAATGCTGGAATCAATGGCACAAGCTTCAGATTCGGTCCTCAGATTTCCAATGTCCTTCAATTGGATGTTGTTACAGGAAAAGGAGACCTAGTGACATGTTCTCCCGTAAACAATTCAGAGCTATTTTATGCTGTTCTTGGAGGATTAGGCCAATTTGGAATTATAACAAAAGCAAGAATAGCTCTAGGACCTGCACCCACTAGGGTGAAATGGCTTCGTCTGTTTTACACAGACTTCTCTGAATTTACTAAAGACCAAGAATACTTAATCTCATTCCATGAAAAAACTGAGACTAGAGGTGCAGATCATGTAGCAGGTTACATTCTAGCAAATCTGCCTCCACCAAGGGATGTTTCGTTTTATCCAGAACAAGATCTGCCAAGGATAAACTCTTTGGTCTCAAAACATGGCCTTGTCTACAGCATTGAGTTAGGCAAATTTTATGACACTAATTCCCAATCACACATTGAAGAGGAACTTGCAAAATTGATCAAGGGATTAAAGTTTATTCCAACATTTGCATTTGAAAAGGATATATCATATGAGGAATTTCAGAATAGACTTCGAGTAGATATAGAATTTCTTAGGTCAAATGGACTTTTGAATGTCCCTCATCCTTGGCTGGACTTATTCGTTCCAAGATCTCGAATCTCAGATTTCAATGAAGGTGTATTGAAGGATATTGTTCTTAAGCAAAATATTCCTTCTGCTAGCATTATATTCTACCCCATGAACCATAACAAGTGGGATGATAGAATGTCAGCAGTTACACCAGATGAAGATATTTTCTATGCTTTGGGATTTTTTCGTGCATCTTTTGCTAATGGGGAAGTGGAAGCTTCTGAGGCTCAAAATGAAGAAATACTAGAATTTTGTAAGGATGCTGGTATTCAAGCTAAGGTTTATCTTGCTTCATACAAAACACAAGAAAAATGGGTGGAACACTATGGCTCCAAATGGGAACTTATTAAAGATAGAAAAGATGAATTTGATCCTAAGAAAATATTGTCACCTGGACAGAAGATTTTCAATTAA 1494 0.3788 MATNKDSNPWSPLQAPKELAQKLSLDPQTLLLASSDFGFIENKTPLAVFEPSSESDIIDLIKYSNSLPNPFTIAPRGQGHSTHGQGLTNDGVVLNMNGLGDFRNGSEIVVYDEYVDVGAEQLWIDVLRATLKHGLTPLSWTDYMYLSVGGTLSNAGINGTSFRFGPQISNVLQLDVVTGKGDLVTCSPVNNSELFYAVLGGLGQFGIITKARIALGPAPTRVKWLRLFYTDFSEFTKDQEYLISFHEKTETRGADHVAGYILANLPPPRDVSFYPEQDLPRINSLVSKHGLVYSIELGKFYDTNSQSHIEEELAKLIKGLKFIPTFAFEKDISYEEFQNRLRVDIEFLRSNGLLNVPHPWLDLFVPRSRISDFNEGVLKDIVLKQNIPSASIIFYPMNHNKWDDRMSAVTPDEDIFYALGFFRASFANGEVEASEAQNEEILEFCKDAGIQAKVYLASYKTQEKWVEHYGSKWELIKDRKDEFDPKKILSPGQKIFN* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0143 497 Gene3D - 96 220 IPR016169 -
Lan15g0143 497 Gene3D - 26 496 IPR016167 -
Lan15g0143 497 ProSiteProfiles PCMH-type FAD-binding domain profile. 41 218 IPR016166 GO:0071949
Lan15g0143 497 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 6 497 - -
Lan15g0143 497 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 219 496 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan15g0143 497 Gene3D - 221 455 IPR016170 -
Lan15g0143 497 PANTHER GULONOLACTONE OXIDASE 6 497 - -
Lan15g0143 497 SUPERFAMILY FAD-linked oxidases, C-terminal domain 219 497 IPR016164 GO:0003824|GO:0050660
Lan15g0143 497 SUPERFAMILY FAD-binding/transporter-associated domain-like 22 217 IPR036318 GO:0050660
Lan15g0143 497 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 45 80 IPR006093 GO:0016491
Lan15g0143 497 Pfam FAD binding domain 45 187 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0143 Lan-Chr15 1510721 1515637 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0143 K00279 - gmx:100808553 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1004 12 16736793 16742006 Lan15g0143 15 1510721 1515637 PCT
Lan15g0143 15 1510721 1515637 Lan12g1004 12 16736793 16742006 PCT