Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0067 ATGGGAGATATTTCACCAGAGAGGAAATCTGGTTGTGGCTTAATATCAGCAGTGTTCAGGAGAAGAGGTTCATGGTCAGGAAAATCAGTCTCTGCTGGCTCGACTCCGACGAGTTCGATCAACGGTAGCGAATTCGCGAAAAGGCGTAGAGGTGGATCGGACATTAGTGCTGCTGCTTCAATTGAAAACACTTCATCTATTGCCTCAAAATATTCATCATCTAGTTACATTGTTACACAATCCCCTTCTTTATCCAACATTCCTCAAATTCCAACAACACCAAAACATGTTGCTCAACAAAGGAAACAACAACCAAATGAAACAGCAATGGCATTGCATGGTGGTTCTTCAGGAGCCACTAGAGGTGTATCGAAAGTCGCGCCGAGTCAAGGCTATGTCAATCAAGGAAGAAAAGTGCCTAGAGAAGTTGTTGGAATTTCTGGTGAGCTTGAAAGCATGATAGCTGATCATCAAAAATCAAAGGGTGGTAACAACAACCTTGTTAGAGCCTCTTCTAGCAATGTTATGTTGTATGGTAATTTAGGTAACCTTAGACAAAGTGGACAAAACACTAGTTCCTATAATGTAATGGAAAATCATCATTACAATGTTGCTAAAGGAACAAAAGGGTACACAAATAACAACAACAACAACAACAATAATAATAATACGACTACAATGGAGAATGTTGGTTATAGGAATAAAGAGGTTGTTAAACCAAGTAAAGAACAATTATGCAGGGCTTTATCAACTAGAATGGATCCTGAACAATTGAAGATAATGGGTAATGAGGATTATAAAAATGGAAGATTTGCAGAAGCATTGTCACTATATGATGCAGCTATTGCAATTGATCCTTATAAAGCTTCTTATAGGAGCAATAGAAGTGCAGCTTTAACTGCTCTTGGAAGACTTTTGGAGGCTGTTTTTGAATGCAGAGAAGCTATTAGAATTGATTCTCATTACCATAGAGCTCATCATCGATTGGGAAATTTGTACTCTAGATTAGGAGATGTAGATAGTGCATTGTATCATTATAAACAAGCAGGAGCAGAGGCAGATCCTGATGAAGTTGCTAAAGTTAAGAATCTTCAGATCCATTTACACAAGTGCACTGAAGCTCGTAGGTTAGGAGATTGGAACACACTTATTACTGTGACCAACAATGCTATATTATCTGGTGCAGATTCTGCTCCACAGATATTTGCATTACAAGCTGAAGCATTATTAAAGCTGAATAGGCATCAAGATGCAGAAAAAGTAATGTCAAAGTGTCCAAATATTGATGTTGATGAGTGTACTAAGTTTTTTGGACCAATTGGTAATGCAAATTTGTTGGTTACACGTGCTAAGGTTGATTTGGTTGCTGGCAGATTTGAAGAAGCTTTAGAAGCAGCTAATAAAGCAACTAGACTAGACTCAAATAACAAAGAAGCAAATAAGGTATTGAGAAAAGTTAGAGCTATTACAAGTGCTAGAACAAAAGGGAATGAACTTTTCAAGGCATCAAAATTTTCTGAAGCTTGTGTTGCTTATGGAGAAGGCCTTGAACATGACCCATATAACTCTCTTTTGCTTTGCAACCGAGCTGCTTGTAGATCAAAATTAAGTCAATATGAAAAAGCTGTTGAAGATTGCAATGCTGCCCTTAATTTAAGGCCATCTTACACCAAAGCTAGGCTAAGAAGGGCACATTGTAATGCCAAGTTGGAAAGATGGGAAGCTTCAATACAAGACTATGAAATATTGGTTAAAGAGACACCAGAAAATGAAGAAGTAAACAAGGCCTTGATGGAGGCCCAAACACAGGTTATGAAAATAAGAGGTGGTGCATAA 1836 0.3796 MGDISPERKSGCGLISAVFRRRGSWSGKSVSAGSTPTSSINGSEFAKRRRGGSDISAAASIENTSSIASKYSSSSYIVTQSPSLSNIPQIPTTPKHVAQQRKQQPNETAMALHGGSSGATRGVSKVAPSQGYVNQGRKVPREVVGISGELESMIADHQKSKGGNNNLVRASSSNVMLYGNLGNLRQSGQNTSSYNVMENHHYNVAKGTKGYTNNNNNNNNNNNTTTMENVGYRNKEVVKPSKEQLCRALSTRMDPEQLKIMGNEDYKNGRFAEALSLYDAAIAIDPYKASYRSNRSAALTALGRLLEAVFECREAIRIDSHYHRAHHRLGNLYSRLGDVDSALYHYKQAGAEADPDEVAKVKNLQIHLHKCTEARRLGDWNTLITVTNNAILSGADSAPQIFALQAEALLKLNRHQDAEKVMSKCPNIDVDECTKFFGPIGNANLLVTRAKVDLVAGRFEEALEAANKATRLDSNNKEANKVLRKVRAITSARTKGNELFKASKFSEACVAYGEGLEHDPYNSLLLCNRAACRSKLSQYEKAVEDCNAALNLRPSYTKARLRRAHCNAKLERWEASIQDYEILVKETPENEEVNKALMEAQTQVMKIRGGA* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0067 611 SMART tpr_5 523 556 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 323 357 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 557 590 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 489 522 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 289 322 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 255 288 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 443 476 IPR019734 GO:0005515
Lan15g0067 611 SMART tpr_5 399 432 IPR019734 GO:0005515
Lan15g0067 611 SUPERFAMILY TPR-like 490 601 IPR011990 GO:0005515
Lan15g0067 611 ProSiteProfiles TPR repeat profile. 255 288 IPR019734 GO:0005515
Lan15g0067 611 Pfam Tetratricopeptide repeat 325 356 IPR019734 GO:0005515
Lan15g0067 611 ProSiteProfiles TPR repeat profile. 443 476 IPR019734 GO:0005515
Lan15g0067 611 MobiDBLite consensus disorder prediction 24 53 - -
Lan15g0067 611 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 607 IPR044534 -
Lan15g0067 611 Pfam Tetratricopeptide repeat 262 317 - -
Lan15g0067 611 PANTHER OS01G0616333 PROTEIN 5 607 - -
Lan15g0067 611 SUPERFAMILY TPR-like 255 479 IPR011990 GO:0005515
Lan15g0067 611 Gene3D Tetratricopeptide repeat domain 253 608 IPR011990 GO:0005515
Lan15g0067 611 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0067 Lan-Chr15 421830 426575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0067 246 352 Glycosyltransferase AT3G11540 32.500 3.78e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0067 - - lang:109326248 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0067 15 421830 426575 Lan14g0188 14 2272996 2278012 LSH