Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0188 ATGGGAGACATTTCACCAGAGAGGAGATATGGCTGTGGCTTAATATCAGCAGTGTTCAGGAGAAGAACTAGCTGGTCAGGGAAATCAATCACTTCTGGCTCTTCTCCAATCAGATCGAATAACGGAACCGATTTCGTTAAGCCATCGAATACCCATGATTCGAAAAGGCGCAGAGGTGGTTCTGACATTAGTGCAGCCTCAGTTGTAACAACTTCATCTAATGCCTCGAAAAATTCATCAACTAGTTATGTTGTCACACAATCCCCTTCTTTATCCAACTACCCTCAAATTCCAACAACAACAACAACAGCAACACATGTCGTGGAACAAAGGAAACAACAACCAAATGAAACAGCAATGGCAGTGCATGGTGGTTCTTCAGGGACTAGAGGTGTATCGAAAGCGGCGCCGACTCAAGGCTATGTAAACCAAGGAAGAAAGGTGCCAAGAGAAGCTGTTGGAATTTCTGGTGAGCTTGAAAGCATGATTGTTGATCATCAAAAAAACAAAGGTAGCAACAACCTTGTTAGAGCTTCTTCTAGCAATGTTATGTTGTATGGTAATTTAGGTAACCTTAGACAAAGTGGACAAAATATTAGTCCTCACAATGCAAAGGAAAATTACTATAACAACATTGGTAATGTTGGAGGGTACACAAAAAACAACAACAACAACAACATTAATAATACAATGGATAATAATGTTGGTTATAAGAGTAAAGAGGTTGTTAAACCAAGCAAAGAACAATTAGGTTCATTATGCAGGGCTTTATCTACTAGAATGGATCCTGAACAATTGAAGATAATGGGTAATGAAGATTATAAGAATGGAAGATTTGCAGAGGCTTTGGCTCTTTATGATGCAGCTATTGCAATTGATCCTAATAAAGCTTCTTATAGGAGCAATAGAAGTGCTGCTTTAACTGCTCTTGGTAGACTTTTAGAGGCTGTGTTTGAATGCAGAGAAGCCATTAGAATTGACTCTCATTACCATAGAGCTCATCATAGATTGGGAAGTTTGTACTTTAGATTAGGAGAAGTAGATAGTGCATTGTATCATTATAAACAAGCAGGAGCAGAGGCTGATCCTGATGAGGTTGCTAAAGTTAAGAATCTTCAAACCCATTTACATAAATGCACTGAGGCTCGTAGGTTAGGAGATTGGAACACACTTATCACTGTCACCAACAATGCTATATCATCTGGTGCAGATTCTGCTCCACAAATATTTGCATTGCAAGCTGAAGCATTGTTGAAGCTACGTAGGCATGAAAATGCAGAAAAAGTAATGTCAAAGTGTAGAAACATTGATTATGATGAGGGTACTAAGTTCTTTGGACCTATTGGTAATGCAAATTTCTTGGTTACTCATGCTAAGGTTCATTTGGCTTCTGGCAGATTTGAAAATGCTTTAGAGGAAGCTAATAAAGCAACTAGGTTGGACTCAAACAACAAGGAAGCAAATAAGGTGTTGAAAAAGATTAGAGCTATTACAAGTTCTAGAGCAAAAGGAAATGAACTTTTCAAGGCATCAAAATTCACTGAGGCTTGTGTTGCATATGGAGAAGGCTTAGAACATGACCCATATAACTCTCTTTTGCTATGCAACCGAGCTGCATGTAGATCAAAGTTAGGACAATATGAAAAAGCTTTGGAAGATTGCAATGCTGCCCTTAACTTAAGACCATCTTACACCAAGGCTAGGCTAAGAAGGGCTGATTGTAATGCAAAGTTGAAAAGATGGGAAGCTTCAATACAAGACTATGAAGTGTTGGTAAAAGAAGCACCAGAAAATGAAGAACTAAACAAGGCCTTGTTGGAGGCCCAAGCCCATCTTTTGAAAAGACAAGGTGATTCATAA 1860 0.3876 MGDISPERRYGCGLISAVFRRRTSWSGKSITSGSSPIRSNNGTDFVKPSNTHDSKRRRGGSDISAASVVTTSSNASKNSSTSYVVTQSPSLSNYPQIPTTTTTATHVVEQRKQQPNETAMAVHGGSSGTRGVSKAAPTQGYVNQGRKVPREAVGISGELESMIVDHQKNKGSNNLVRASSSNVMLYGNLGNLRQSGQNISPHNAKENYYNNIGNVGGYTKNNNNNNINNTMDNNVGYKSKEVVKPSKEQLGSLCRALSTRMDPEQLKIMGNEDYKNGRFAEALALYDAAIAIDPNKASYRSNRSAALTALGRLLEAVFECREAIRIDSHYHRAHHRLGSLYFRLGEVDSALYHYKQAGAEADPDEVAKVKNLQTHLHKCTEARRLGDWNTLITVTNNAISSGADSAPQIFALQAEALLKLRRHENAEKVMSKCRNIDYDEGTKFFGPIGNANFLVTHAKVHLASGRFENALEEANKATRLDSNNKEANKVLKKIRAITSSRAKGNELFKASKFTEACVAYGEGLEHDPYNSLLLCNRAACRSKLGQYEKALEDCNAALNLRPSYTKARLRRADCNAKLKRWEASIQDYEVLVKEAPENEELNKALLEAQAHLLKRQGDS* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0188 619 Pfam Tetratricopeptide repeat 533 564 IPR001440 GO:0005515
Lan14g0188 619 MobiDBLite consensus disorder prediction 25 81 - -
Lan14g0188 619 ProSiteProfiles TPR repeat profile. 531 564 IPR019734 GO:0005515
Lan14g0188 619 ProSiteProfiles TPR repeat profile. 263 296 IPR019734 GO:0005515
Lan14g0188 619 SUPERFAMILY TPR-like 263 487 IPR011990 GO:0005515
Lan14g0188 619 MobiDBLite consensus disorder prediction 115 136 - -
Lan14g0188 619 Gene3D Tetratricopeptide repeat domain 261 617 IPR011990 GO:0005515
Lan14g0188 619 SMART tpr_5 297 330 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 531 564 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 331 365 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 407 440 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 565 598 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 497 530 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 263 296 IPR019734 GO:0005515
Lan14g0188 619 SMART tpr_5 451 484 IPR019734 GO:0005515
Lan14g0188 619 MobiDBLite consensus disorder prediction 25 48 - -
Lan14g0188 619 SUPERFAMILY TPR-like 499 609 IPR011990 GO:0005515
Lan14g0188 619 MobiDBLite consensus disorder prediction 64 81 - -
Lan14g0188 619 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 615 IPR044534 -
Lan14g0188 619 Pfam Tetratricopeptide repeat 333 364 IPR019734 GO:0005515
Lan14g0188 619 PANTHER OS01G0616333 PROTEIN 5 615 - -
Lan14g0188 619 Pfam TPR repeat 270 311 - -
Lan14g0188 619 ProSiteProfiles TPR repeat profile. 451 484 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0188 Lan-Chr14 2272996 2278012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0188 254 360 Glycosyltransferase AT3G11540 29.915 7.08e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0188 - - lang:109326248 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0067 15 421830 426575 Lan14g0188 14 2272996 2278012 LSH