Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0027 ATGAAGAATCGGTATCCCATGCCACAGAGAAAATGGTTCCTATGGTTAGCCATAACGGGGTTGATCGGTGCGGTATTCTTCATAATGACATTGATCCAATCACCCAACACATTGTGTATAGAGACTCAAACCATAACCCAAACCCGAACCCGAACTCGAGTATCTGAGTATTACAACCCAACTACAATCCAATTAAAAGCAATACTCCACTATGCCACCTTGCGCGTGGTTCCCCAACAATCTCTCTCTGAGATCAAGATAAGTTTTGATGTTCTCAAATCCCTTGGTCGACCAAGCAACTTCCTCGTATTTGGTCTTGGCCATGATTCACTCATGTGGGCCTCATTTAACCCACGTGGCACAACGCTATTCCTGGAGGAAGATCCTAAGTGGGTCCAGACCGTTCTCAAAGACGCGCCTAACCTACGCGCGCATGCGGTTCGTTACCGCACGCAGCTTCGTGATGCAGACGCGCTTCTCTCCTCGTACCGCTCCGAACCTGCGTGTTCTCCCTCGCGTGCGTACCTGCGTGACAACGGCGCGTGTAAATTAGCACTTGATAATCTTCCTGAGGAGGTGTATGAGACGGAGTGGGATTTGATTATGATTGACGCGCCCAAGGGGTATTTTGCGGAGGCGCCGGGGAGGATGGCGGCGGTGTACTCCGCGGCGGTGATGGCGCGTGGAAGGAAGGGAAGCGGTGTGACACACGTGTTTTTGCATGATGTGAATAGGAAGGTGGAGAAGGTTTATGCGGAGGAGTTTCTTTGTAGGAAGAATTTGGTTAAGAGTGTTGGAAGGTTGTGGCACTTCGAGATACCACCTCAAACAAATCACATCGATGTTCCTGCTTTTTGTTAG 861 0.4983 MKNRYPMPQRKWFLWLAITGLIGAVFFIMTLIQSPNTLCIETQTITQTRTRTRVSEYYNPTTIQLKAILHYATLRVVPQQSLSEIKISFDVLKSLGRPSNFLVFGLGHDSLMWASFNPRGTTLFLEEDPKWVQTVLKDAPNLRAHAVRYRTQLRDADALLSSYRSEPACSPSRAYLRDNGACKLALDNLPEEVYETEWDLIMIDAPKGYFAEAPGRMAAVYSAAVMARGRKGSGVTHVFLHDVNRKVEKVYAEEFLCRKNLVKSVGRLWHFEIPPQTNHIDVPAFC* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0027 286 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 65 280 IPR006514 GO:0045492
Lan15g0027 286 Gene3D Vaccinia Virus protein VP39 78 282 IPR029063 -
Lan15g0027 286 PANTHER OS11G0490100 PROTEIN 1 286 IPR006514 GO:0045492
Lan15g0027 286 Pfam Polysaccharide biosynthesis 84 271 IPR021148 -
Lan15g0027 286 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0027 Lan-Chr15 182425 183619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0027 - - gmx:100791951 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0027 15 182425 183619 Lan3g1429 3 25895587 25896780 LSH
Lan15g0027 15 182425 183619 Lan12g0457 12 10746423 10747573 PCT
Lan12g0457 12 10746423 10747573 Lan15g0027 15 182425 183619 PCT