Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0457 ATGCAAGTGAGTGAAAAAAAATGGTTCGTGAGTTTATTAGCCATAGTGGGCATAATAGGTGCATCACTCTTCATAGTAAGTTTGATTCAAACCCCAAACAACTCTTTCCTATGTTCCGTTAATTATTCCAACAAAAACGACAACGCCCCAACGTCGTTGCAACTCAAAGCAATACTCCACTACGCAACCTCATCCATTACCCCTCAACAATCCTTCTCAGAAATCTCCATAACATTCGATGTCTTGAAATCCCTAAATCGCCCCTGCAACTTCCTCGTGTTCGGGTTAGGCCTCGATTCGCTAATGTGGGCCAGCCTCAATCCACGTGGCAGGACATTATTCCTCGAGGAAGACCCTTCGTGGTTCCAGAAGGTGGTGAAGGACGCGCCGGAGCTCAACGCGCACACGGTTAAGTACCGAACGCAGCTGCGTGAGGCCGACGCGCTTTTATCCTCGTATCGAAAAGAACCGTTTTGTTCTCCGGTCGGGGCTATGCCGCTACGTGGCAACGAGAGGTGTAAACTGGCGCTGCATAATTTGCCTGATGAGGTTTATGATACGGAGTGGGATCTGATTATGGTTGATGCGCCGAAGGGGTATTTCGCGGAGGCGCCGGGGAGGATGGCGGCGATATTCACGGCGGCGGTGATGGGGAGGAATAGGAAGGGATCCGGTGTGACGCACGTGTTCTTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTATGCTGAGGAGTTTCTATGTAGGAAGAATTTGGTTAAAGGTGTTGGAAGGCTTTGGCATTTTGAGATACCTTCTAAGGTTAATAGTACAATCTATGACACTGTTTTTTGCTAG 837 0.4886 MQVSEKKWFVSLLAIVGIIGASLFIVSLIQTPNNSFLCSVNYSNKNDNAPTSLQLKAILHYATSSITPQQSFSEISITFDVLKSLNRPCNFLVFGLGLDSLMWASLNPRGRTLFLEEDPSWFQKVVKDAPELNAHTVKYRTQLREADALLSSYRKEPFCSPVGAMPLRGNERCKLALHNLPDEVYDTEWDLIMVDAPKGYFAEAPGRMAAIFTAAVMGRNRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKNLVKGVGRLWHFEIPSKVNSTIYDTVFC* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0457 278 Pfam Polysaccharide biosynthesis 74 262 IPR021148 -
Lan12g0457 278 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 55 271 IPR006514 GO:0045492
Lan12g0457 278 PANTHER OS11G0490100 PROTEIN 3 268 IPR006514 GO:0045492
Lan12g0457 278 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 3 268 - -
Lan12g0457 278 Gene3D Vaccinia Virus protein VP39 64 276 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0457 Lan-Chr12 10746423 10747573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0457 - - gmx:100820087 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0027 15 182425 183619 Lan12g0457 12 10746423 10747573 PCT
Lan3g1429 3 25895587 25896780 Lan12g0457 12 10746423 10747573 PCT
Lan12g0457 12 10746423 10747573 Lan15g0027 15 182425 183619 PCT
Lan12g0457 12 10746423 10747573 Lan3g1429 3 25895587 25896780 PCT