Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0944 ATGTCTTCTTCTTCTTCTTCAGCGCTTAAGGAAGAGAAGGAAGATGAAGCGGTTAAAGGAGGAGAGCTATTGTTCTGTGGTGCCACGTGTTGGGATATGATTGGTCGTAAGAAAGGTATCGACGGTAACTTGGTCTCCCCCACACGCCTCCGTCCTCTCATTGGCGTCGATATTCGCTACGTTGTCTCCGGTTGCGCATCTTGTCATTGCGTTGCGTTGGATGTCGAAGGGCGTTGCTATACATGGGGCCGTAACGATAAGGGGCAACTGGGTCATGGAGATACCATTCAGCGCGATAGGCCAACTGTGGTTTCTGGACTTTCTAAATACAAGATTCTCAAAGCTGGATCAGGGAGGAGTCATACAGTGGTTGTTACAGATGATGGAAATTCCCTAGCCTTTGGATGGAACAAGCATGGACAGCTTGGTGTAGGTTCTGTTCGAAATGAAATTGAATCATCTCCCGTTCGCTGTCTTGTGTCTGAAGTAACATATACTACTTGTGGTGGTGACTTCACAGTGTGGTTATCTTCTGTTGAAGGATCTTCTATACTGACTGCTGGGCTTCCACAGTATGGACAGCTTGGACATGGAACAGATAATGAGTATAATTCCAAAGACAGTTCTGTAAGGTTGGTTTATGAAGCCCAGCCACGTCCCCGGGCAATTGCATCTCTTGCTGGTGAAACTATTGTCAAAGTGGCATGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTATGTCTACACGTGGGGTTACGGTGGTTATGGAAGACTAGGGCATAGGGAGCAGAAGGATGAGTGGGCCCCACGTCGTGTTGATGTCTTCCAGAATAGAAATGTTTTGCCTCCTGATGCAATTATTTCAGCTGGTTCTGTGAATTCTGCATGTACTGCTGCTGGAGGGCAGTTGTATATGTGGGGCAAATTAAAGAACAATGGTGATGACTGGATGTATCCTAAGCCTCTAATGGATTTAAGTGGCTGGAATTTACGTTGCATGGATTCAGGCGGTATGCACCATTTTGTTGGGGCTGATTCCTCATGCATAAGCTGGGGCCAAGCCCAGAACGGAGAGCTGGGATATGGACCTATGGGACAAAAGTCTTCAGCGGTACCCAAAAAGGTGGATATACTTGAGGGCATGCATGTTATGAGTGTTGCTTGTGGTACGGCTCATTCAATGGTTATTGTCGATAGAACAAATGTTGCTGATCAACTTGAGCAGCACCTAAATTCTCATTTCCTGCAGCTTGATGTATATGATGGAAAAGCTATTGGTGAAGCAAATGAGCCTGCAGCCAAAACTCCAGTGCCTAAGCAGCCTGCAAAAAAGGGTGCAAAAGGAGCTGACAATTCAAAGAAGAGGAAAAATGCAAAAGATTCATCGGACGAGGACGAGGAAGAGGATGAGGATACTGAAGAGAGTGACAATACTGACGAGGATCAAGTTAATGGCAAGGCTGGGGTAAAAAGGGCAGGTAGAGGCCGAGGCAGGGCTTCAGCATCCAAAAATAGCAGCTCCGGCCGAGGCCGTGGACGCGGCCGCACTCCAGCATCCCCTCCAGTGAAATCATCTGGCAAGAGAGGAAGACCTAGAAAGTCGTCATGA 1617 0.4743 MSSSSSSALKEEKEDEAVKGGELLFCGATCWDMIGRKKGIDGNLVSPTRLRPLIGVDIRYVVSGCASCHCVALDVEGRCYTWGRNDKGQLGHGDTIQRDRPTVVSGLSKYKILKAGSGRSHTVVVTDDGNSLAFGWNKHGQLGVGSVRNEIESSPVRCLVSEVTYTTCGGDFTVWLSSVEGSSILTAGLPQYGQLGHGTDNEYNSKDSSVRLVYEAQPRPRAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGYGGYGRLGHREQKDEWAPRRVDVFQNRNVLPPDAIISAGSVNSACTAAGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGGMHHFVGADSSCISWGQAQNGELGYGPMGQKSSAVPKKVDILEGMHVMSVACGTAHSMVIVDRTNVADQLEQHLNSHFLQLDVYDGKAIGEANEPAAKTPVPKQPAKKGAKGADNSKKRKNAKDSSDEDEEEDEDTEESDNTDEDQVNGKAGVKRAGRGRGRASASKNSSSGRGRGRGRTPASPPVKSSGKRGRPRKSS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0944 538 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 115 125 IPR000408 -
Lan14g0944 538 Gene3D - 211 407 IPR009091 -
Lan14g0944 538 PRINTS Chromosome condensation regulator RCC1 signature 78 94 IPR000408 -
Lan14g0944 538 PRINTS Chromosome condensation regulator RCC1 signature 112 125 IPR000408 -
Lan14g0944 538 PRINTS Chromosome condensation regulator RCC1 signature 131 147 IPR000408 -
Lan14g0944 538 PRINTS Chromosome condensation regulator RCC1 signature 234 250 IPR000408 -
Lan14g0944 538 PRINTS Chromosome condensation regulator RCC1 signature 250 264 IPR000408 -
Lan14g0944 538 MobiDBLite consensus disorder prediction 449 465 - -
Lan14g0944 538 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 234 244 IPR000408 -
Lan14g0944 538 MobiDBLite consensus disorder prediction 466 481 - -
Lan14g0944 538 MobiDBLite consensus disorder prediction 433 538 - -
Lan14g0944 538 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 248 303 IPR000408 -
Lan14g0944 538 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 129 179 IPR000408 -
Lan14g0944 538 PANTHER PROTEIN RCC2 7 519 IPR028641 -
Lan14g0944 538 SUPERFAMILY RCC1/BLIP-II 20 402 IPR009091 -
Lan14g0944 538 Pfam Regulator of chromosome condensation (RCC1) repeat 128 174 IPR000408 -
Lan14g0944 538 Pfam Regulator of chromosome condensation (RCC1) repeat 353 399 IPR000408 -
Lan14g0944 538 Pfam Regulator of chromosome condensation (RCC1) repeat 247 285 IPR000408 -
Lan14g0944 538 Pfam Regulator of chromosome condensation (RCC1) repeat 76 125 IPR000408 -
Lan14g0944 538 Pfam Regulator of chromosome condensation (RCC1) repeat 185 244 IPR000408 -
Lan14g0944 538 Gene3D - 6 210 IPR009091 -
Lan14g0944 538 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 247 IPR000408 -
Lan14g0944 538 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 77 128 IPR000408 -
Lan14g0944 538 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 402 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0944 Lan-Chr14 15843728 15849901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0944 - - gmx:100819842 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0944 14 15843728 15849901 Lan14g0944 14 15843728 15849901 ECH
Lan15g1208 15 20525512 20531894 Lan14g0944 14 15843728 15849901 LSH