Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0861 ATGGAACGTGCTCGTAGACTCGCGAACCGTGCAATTCTGAAGCGCCTGGTTTCTGAGGCAAAGCAGAATCTTCATAAAGATCCTATTTTGAATTCAACTACCCCTATATTGTACAGTAAATCCAAATGCATTTCATCTATTCCATCATCCTCTGTTTTCAGAAACAGGGGATTGAAAACAGAGAATTTTCTCTCACACAACATTGGTTCTTCTCAAACCCGGTCCATTACAGTTGAGGCACTGAAACCAAGTGACACATTCCCTCGTCGCCACAACTCTGCCACACCAGAAGAACAGAGCAAGATGGCTATCACGTGCGGCTTCGACAACCTTGACTCGCTCATCGATGCAACGGTGCCTAAATCGATCCGTTTGAAGGAGATGAAGTTCCACAAGTTCGATGAAGGGTTAACAGAGGGCCAAATGTTGGAGCACTTGAATTATTTAGCATCAAAGAACAAGGCTTTCAAGTCATTCATTGGTATGGGATACTATAACACTCATGTTCCACCAGTTATATTGAGGAACATTATGGAAAACCCTGCTTGGTACACTCAGTACACTCCTTACCAAGCTGAGATATCTCAAGGGCGTCTTGAATCGTTGCTGAATTATCAAACCGTGATCACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGAACTGCTGCAGCTGAAGCAATGTCTATGTGTAATAACATTCTGAAGGGAAAGAAGAAGACTTTTATCATTGCTTCTAATTGTCATCCACAAACCATTGATATTTGCAAGACTAGATCTGCTGGTTTTGATCTTAAGGTAGTTACTGAAGATCTTAAGGATATCGATTACAAATCAGGTGATGTCTGTGGTGTTCTTGTTCAGTATCCGGGTACGGAGGGTGAGGTTTTGGATTATGGAGAGTTTATTAAGAAGGCTCATGCTAATGGAGTTAAGGTTGTTATGGCAACTGATTTGTTGGCACTGACTCTTCTGAAGCCTCCTGGTGAATTGGGGGCAGATATTGTTGTCGGTTCTGCTCAGAGGTTTGGTGTTCCAATGGGTTATGGAGGTCCTCATGCTGCATTTCTAGCCACATCTCAAGAGTACAAGAGGATGATGCCTGGTAGAATTATTGGTCTCAGTGTTGATTCTTCTGGAAAGACTGCGTTGCGGATGGCCATGCAAACTAGGGAACAACATATTCGTAGGGACAAGGCTACCAGCAACATTTGCACTTCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTGTATCATGGACCTGAAGGCCTTAAAACCATTGCTGAACGGGTTCATGGTCTTGCTGGGGTGTTTTCCCTAGGATTAAAGAAACTTGGAAACGTGGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGATTAAGACTGCCAATGCCCATGCAATTGTTGATGCCGCTCGCAAAAGTGAAATAAATTTGCGAGTTGTGGATGGGAACACCATCACTGTTGCCTTTGATGAAACAACCACGATAGAGGATGTTGATAATCTTTTCAAAGTTTTCGCTGGCAGCAAGCCTGTTTCCTTCACAGCTGCATCTCTTGCACCGGAGTTTCAGACTGCATTTCCTTCTGGACTAATTAGGCAGAGCCCTTATCTGACACACCCCATCTTTAACACGTACCACACTGAGCATGAGTTGCTTAGGTACATTCACAGGCTACAGTCAAAAGATCTCTCACTGTGCCACAGTATGATCCCGCTGGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATTCACCCTTTTGCACCAGTTGAACAGGCTCAAGGTTATCAGGAAATGTTCGAAAATTTGGGTAACCTGCTGTGTGCCATCACTGGGTTTGACTCCTTCTCTCTGCAACCTAATGCTGGTGCTGCAGGAGAATATGCCGGACTGATGGTTATTCGCGCATATCACTTGGCAAGAGGAGACCACCATCGCAATGTTTGCATCATACCCGTTTCTGCGCATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTAACTATCGGAACAGATGCGAAGGGAAACATTAATATTGAAGAGTTGAGGAAGGCTGCTGAAACAAATAAGGAGAACTTATCTGCATTTATGGTTACATATCCTTCAACCCATGGTGTTTATGAAGAGGGTATTGATGAGATATGCAAGATAATTCATGATAACGGAGGCCAAGTATACATGGATGGAGCTAACATGAATGCACAGGTGGGACTTACAAGCCCGGGTTGGATTGGAGCTGATGTATGCCATCTGAATCTCCACAAGACATTTTGCATCCCTCATGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACATCCAGTGGTTGCCACTGGAGGCATTCCTGCACCTGAGAAATCTCTGCCACTTGGTACCATTTCTGCTGCACCATGGGGCTCAGCACTGATATTGCCAATCTCATATAGTTATATAGCAATGATGGGTTCTAAAGGACTCACTGAAGCATCAAAGATAGCCATTTTGAACGCAAATTACATGGCAAAACGATTGGAGAATCATTACCCTGTTCTTTTCCGGGGAGTTAATGGAACATGTGCTCATGAATTCATTATCGACTTAAGAGGCTTTAAGAATTCTGCTGGCATAGAGCCTGAAGATGTTGCAAAGCGCCTTATGGACTACGGGTTTCACGGACCTACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCGCTTATTTCCATCCGAGAAGAAATCGCTGAGATTGAGAAAGGAAAAGCTGACATTAACAACAATGTACTTAAGGGTGCCCCTCACCCACCATCACTTCTCATGGGAGATGCATGGACAAAACCATACACCAGGGAATATGCAGCATTCCCTGCTTCCTGGCTCCGCGTTTCTAAGTTCTGGCCTACCACAGGACGTGTCGATAATGTGTACGGCGACCGCAACCTCATCTGCACCCTTCAACCAGCATCACAGGTTGTAGAAGAACAAGCTGCTGCTGCTACAGCCTAA 3147 0.4468 MERARRLANRAILKRLVSEAKQNLHKDPILNSTTPILYSKSKCISSIPSSSVFRNRGLKTENFLSHNIGSSQTRSITVEALKPSDTFPRRHNSATPEEQSKMAITCGFDNLDSLIDATVPKSIRLKEMKFHKFDEGLTEGQMLEHLNYLASKNKAFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTVITDLTGLPMSNASLLDEGTAAAEAMSMCNNILKGKKKTFIIASNCHPQTIDICKTRSAGFDLKVVTEDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANGVKVVMATDLLALTLLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGLSVDSSGKTALRMAMQTREQHIRRDKATSNICTSQALLANMAAMYAVYHGPEGLKTIAERVHGLAGVFSLGLKKLGNVEVQDLPFFDTVKIKTANAHAIVDAARKSEINLRVVDGNTITVAFDETTTIEDVDNLFKVFAGSKPVSFTAASLAPEFQTAFPSGLIRQSPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPVEQAQGYQEMFENLGNLLCAITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELRKAAETNKENLSAFMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVATGGIPAPEKSLPLGTISAAPWGSALILPISYSYIAMMGSKGLTEASKIAILNANYMAKRLENHYPVLFRGVNGTCAHEFIIDLRGFKNSAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYTREYAAFPASWLRVSKFWPTTGRVDNVYGDRNLICTLQPASQVVEEQAAAATA* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0861 1048 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1046 IPR020581 GO:0004375|GO:0006546
Lan14g0861 1048 CDD GDC-P 559 954 IPR020581 GO:0004375|GO:0006546
Lan14g0861 1048 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 81 1038 IPR003437 GO:0004375|GO:0006544
Lan14g0861 1048 CDD GDC-P 139 516 IPR020581 GO:0004375|GO:0006546
Lan14g0861 1048 SUPERFAMILY PLP-dependent transferases 551 1033 IPR015424 -
Lan14g0861 1048 Gene3D - 598 824 IPR015421 GO:0003824
Lan14g0861 1048 Gene3D - 170 430 IPR015421 GO:0003824
Lan14g0861 1048 SUPERFAMILY PLP-dependent transferases 90 516 IPR015424 -
Lan14g0861 1048 TIGRFAM gcvP: glycine dehydrogenase 90 1031 IPR003437 GO:0004375|GO:0006544
Lan14g0861 1048 Gene3D Aspartate Aminotransferase, domain 1 159 512 IPR015422 GO:0003824
Lan14g0861 1048 Pfam Glycine cleavage system P-protein 90 516 IPR020581 GO:0004375|GO:0006546
Lan14g0861 1048 Pfam Glycine cleavage system P-protein 551 809 IPR020581 GO:0004375|GO:0006546
Lan14g0861 1048 Gene3D Aspartate Aminotransferase, domain 1 846 985 IPR015422 GO:0003824
Lan14g0861 1048 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1046 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0861 Lan-Chr14 15283724 15289851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0861 K00281 - gmx:100819714 1853.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0861 14 15283724 15289851 Lan3g1152 3 23802803 23810984 LSH
Lan3g1152 3 23802803 23810984 Lan14g0861 14 15283724 15289851 PCT
Lan14g0861 14 15283724 15289851 Lan3g1152 3 23802803 23810984 PCT