Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0801 ATGAACAGGCCAGGAGATTGGAACTGTAGGACATGCAAGCACATGAATTTCCAGAGAAGAGAGTCGTGCCAAAGATGCGGGGAGCCAAAGGGTGCAACTGACTTATACGGTGGTGGTGGTGGCGGCAGCTTTGGTGGCAGAGGCTCATCCTCATTTGGCAGCTTCACTACTGGTCCTGATGTCCGCCCTGGTGATTGGTACTGCACGGTGGCTAACTGTGGAGCCCACAACTTTGCTAGCCGCTCCAGCTGTTTCAAGTGTGGTGCCTCCAAGGAGGACTCCGTTACCGGAGGATTTGATGCCGATATGCCCCGCTTGAGAGGCTTTGGATTTGGTGGTGGCGGAAGCGGCGGCGGTGGTAGCTCCACCCACCCTGGTTGGAAATCCGGGGACTGGTTATGCACCAGATCTGGATGCAATGAGCATAACTTCGCTAATAGAATGGAATGCTACAGATGCAATGCACCAAGAGACTCAAACAGTGCCAGATCTCCTTATCAATCCTAA 507 0.5345 MNRPGDWNCRTCKHMNFQRRESCQRCGEPKGATDLYGGGGGGSFGGRGSSSFGSFTTGPDVRPGDWYCTVANCGAHNFASRSSCFKCGASKEDSVTGGFDADMPRLRGFGFGGGGSGGGGSSTHPGWKSGDWLCTRSGCNEHNFANRMECYRCNAPRDSNSARSPYQS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0801 168 SUPERFAMILY Ran binding protein zinc finger-like 2 31 IPR036443 -
Lan14g0801 168 Pfam Zn-finger in Ran binding protein and others 62 93 IPR001876 -
Lan14g0801 168 Pfam Zn-finger in Ran binding protein and others 128 157 IPR001876 -
Lan14g0801 168 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Lan14g0801 168 ProSiteProfiles Zinc finger RanBP2 type profile. 62 93 IPR001876 -
Lan14g0801 168 Gene3D - 57 94 - -
Lan14g0801 168 Gene3D - 2 32 - -
Lan14g0801 168 Gene3D - 121 160 - -
Lan14g0801 168 ProSiteProfiles Zinc finger RanBP2 type profile. 128 159 IPR001876 -
Lan14g0801 168 SMART zf_4 130 156 IPR001876 -
Lan14g0801 168 SMART zf_4 64 90 IPR001876 -
Lan14g0801 168 SMART zf_4 5 29 IPR001876 -
Lan14g0801 168 ProSitePatterns Zinc finger RanBP2-type signature. 66 87 IPR001876 -
Lan14g0801 168 ProSitePatterns Zinc finger RanBP2-type signature. 132 153 IPR001876 -
Lan14g0801 168 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Lan14g0801 168 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Lan14g0801 168 SUPERFAMILY Ran binding protein zinc finger-like 121 160 IPR036443 -
Lan14g0801 168 PANTHER ZINC FINGER PROTEIN 1 160 - -
Lan14g0801 168 SUPERFAMILY Ran binding protein zinc finger-like 58 93 IPR036443 -
Lan14g0801 168 PANTHER OS02G0203700 PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0801 Lan-Chr14 14880568 14882663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0801 - - gmx:100799240 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1022 15 19345077 19346833 Lan14g0801 14 14880568 14882663 LSH