Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0782 ATGGGGTTATTGGTAGATGCAAAGTTGAGTAGTTCTCTTGTTTTTTTGTTACTTAATGTAATGTTAGTGTGTTCAGTGAATGGAATTGGTGTTAACTGGGGTACACAGGCCACACACCCTTTGTCACCAACCAAAGTGGTGAAATTGATGAAAGATAATGGTATTCAAAAGGTTAAGCTTTTTGATGCTGATCCTGGAATCTTAAGTGCTCTCAAGAAATCTGGGCTCCAAGTCATGGTGGGTATTCCAAATGACATGCTTTTTACACTTGCTAATAGCTTGCAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCAGCACATGTCTCTTCTGGTGGTGTAGACATAAGGTATGTTGCAGTGGGGAATGAACCATTTTTGTCAACATATAATGGTACCTTTGAATCCACAACTCTTCCAGCTCTTCAAAATATCCAAGCAGCTCTCACAAAATCTGGTTTGAGCAACAGGGTTAAAGTGACTGTCCCTTTGAATGCCGATGTATATCAGAGTTCATCAGAGAAGCCTTCGGACGGCGACTTCAGGACAGACATCCATGACCTCATGCTACAAATTGTCAAGTTCTTGAATGACAATGGAGCTCCATTCACTGTGAACATATATCCTTTTCTAAGCCTCTATGAAGATGCCAATTTTCCCGTTGACTACGCTTTTTTCAACGGATTTCAGCCTGCTATAGATGACAACGGAAAAGCCTATGATAATGTCTTTGATGCTAACCATGATACTCTAGTATGGGCACTACAGAAGAATGGTTTTGGAAACTTGCCTATAATCGTGGGAGAAATTGGTTGGCCTACAGATGGAGACAGAAATGCTAACTTTCGATATGCGCAAAACTTTAACCAAGGTTTTATATCTCGCTACGCTACGGGAAAAGGGACCCCGATGAGGCCAGGTCCCGTAGATGCCTACTTGTTTAGTCTCATAGATGAAGATAACAAGAGTACTCAGCCAGGTAACTTCGAACGTCATTGGGGGGTGTTTTACTTCGATGGACAACCGAAATACGAGCTAAACCTTGGGTCAAATAGAGGTATAATAGGAGCTAGTGGAGTGGATCATTTGGCTAAGAAATGGTGTGTTTTGAAAGGCAATGCAAACTTAAATAGTGATGAAGTTGCACCAAGTGTGGCCTATGCATGTCAAAATGCTGATTGTACTAGTCTTGGTTATGGAACTTCATGTGGCAATTTAGATATTAAAGGGAATATATCTTATGCATTTAATAGTTACTACCAAATCAATGACCAAATGGATAGTGCTTGTAAATTCCCTGGCCTTTCTATGATCACTGACAAAGATCCTTCAGTTGGAAATTGCAGATTCAAAACCATGATTCTGACAGATTCTGTAGGGATACATGGAAGAATTGGGCCTCTAGGAACACTAGTGCTCTATGTGTTCTTGTTTTTTACTATGTTGTAA 1449 0.403 MGLLVDAKLSSSLVFLLLNVMLVCSVNGIGVNWGTQATHPLSPTKVVKLMKDNGIQKVKLFDADPGILSALKKSGLQVMVGIPNDMLFTLANSLQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGDFRTDIHDLMLQIVKFLNDNGAPFTVNIYPFLSLYEDANFPVDYAFFNGFQPAIDDNGKAYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANFRYAQNFNQGFISRYATGKGTPMRPGPVDAYLFSLIDEDNKSTQPGNFERHWGVFYFDGQPKYELNLGSNRGIIGASGVDHLAKKWCVLKGNANLNSDEVAPSVAYACQNADCTSLGYGTSCGNLDIKGNISYAFNSYYQINDQMDSACKFPGLSMITDKDPSVGNCRFKTMILTDSVGIHGRIGPLGTLVLYVFLFFTML* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0782 482 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Lan14g0782 482 Gene3D Glycosidases 27 354 - -
Lan14g0782 482 SMART X8_cls 366 450 IPR012946 -
Lan14g0782 482 Pfam X8 domain 366 436 IPR012946 -
Lan14g0782 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 17 457 - -
Lan14g0782 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 457 IPR044965 GO:0004553|GO:0005975
Lan14g0782 482 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Lan14g0782 482 Gene3D - 362 458 - -
Lan14g0782 482 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0782 Lan-Chr14 14695332 14699152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0782 13 468 Glycoside Hydrolase AT4G31140 67.763 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0782 K19893 - gmx:100796552 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0782 14 14695332 14699152 Lan10g0979 10 14826744 14829321 PCT