Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0979 ATGGGGTTTGCAAAATTTAAGGGGTGTTTTGTTCTTGTGTTTTGTGTTGGATTGTTGGTGGGTTCAGTGAGTGGAATTGGTGTTAATTGGGGCACACAATCATCACACCCTTTGCCACCATCTACTGTAGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGATTCTGATATTTTAGATGCTCTAAAAAAGTCTGGGATTCAAGTAATGGTGGGTATTCCTAATGACATGCTCTATACTCTGGCTAATAGTGTGCAAGCAGCTGAAAAATGGGTTTCTAAGAATATCTCAGCACATGTCTCTTCTGGAGGAGTAGATATCAGGTACATTGCTGTGGGAAACGAACCTTTCTTGTCAACTTACAACGGTACCTTTGAATCTACAACTCTTCCAGCTCTTCAAAATATCCAATCAGCTCTTATAAAATCTGGTCTTGGCAATCAGGTTAAAGTCACTGTCCCTATGAATGCTGATGTCTATCTGAGTTCATCAGATAAACCTTCCGATGGTGACTTCAGGCCCGACATCCACGATCTCATGCTGCAGATTGTCAAGTTCTTGAGCCAGAACAATGCTCCATTTACCGTGAACATCTATCCTTTTATCAGCCTCTATTTGGATGCCAATTTTCCTGTTGACTTCGCCTTTTTCAATGGCTTCCAGACTCCTATAAACGATAATGGAAGGATCTATGACAATGTCTTAGATGCAAACCACGACACTCTAGTATGGGCACTGCAGAAGAATGGTTTTGGAAACTTGCCTATAATTGTTGGAGAAATAGGGTGGCCTACGGATGGAAACCGTAATGCAAATATTCAATACGCGCAACGTTTTAACCAAGGCTTCATGTCACGTTTCCTTGCCGGAAAGGGTACTCCAATAAGGCCCGGTCCCATAGATGCATACTTGTTTAGCCTCATAGATGAAGATAGCAAAAGCATTCAGCCGGGTAATTTCGAACGTCATTGGGGGATGTTTTACTTCGATGGAAAGCCGAAGTATCTACTTAGCCTCGGAACAAGAACAAATGGTTTAGTAGGTGCTAGTGGTGTTTCATATCTGCCCAAAAAATGGTGTGTTCTGAAACCCTCAGCAAACCTGAATAGTGATCAAGTGGCACCAAGTGTGTCTTATGCTTGTCAAAATGCAGATTGCACTAGTCTTGGTTATGAAACTTCGTGCGGAGGCTTAGATGTTCGCGGTAATCTTTCATATGCATTCAATAGCTACTACCAGGTGAATGACCAGATTGACAGTGCATGCAAATTTCCGGGCCTTTCTGTTGTCACTGACAATGATCCTTCAACTCCAAATTGCAAATTCATAATCATGATCCAGACAGATTCGGCTTACTATTTTCGGAATTGGAGGAGAATTTGGTCCCTTCCAATAATGGTCTTTGTATTTCTGTTTCTTAATGTTATGTAA 1449 0.412 MGFAKFKGCFVLVFCVGLLVGSVSGIGVNWGTQSSHPLPPSTVVKMLKDNGIQKVKLFDADSDILDALKKSGIQVMVGIPNDMLYTLANSVQAAEKWVSKNISAHVSSGGVDIRYIAVGNEPFLSTYNGTFESTTLPALQNIQSALIKSGLGNQVKVTVPMNADVYLSSSDKPSDGDFRPDIHDLMLQIVKFLSQNNAPFTVNIYPFISLYLDANFPVDFAFFNGFQTPINDNGRIYDNVLDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGNRNANIQYAQRFNQGFMSRFLAGKGTPIRPGPIDAYLFSLIDEDSKSIQPGNFERHWGMFYFDGKPKYLLSLGTRTNGLVGASGVSYLPKKWCVLKPSANLNSDQVAPSVSYACQNADCTSLGYETSCGGLDVRGNLSYAFNSYYQVNDQIDSACKFPGLSVVTDNDPSTPNCKFIIMIQTDSAYYFRNWRRIWSLPIMVFVFLFLNVM* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0979 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 14 458 - -
Lan10g0979 482 SMART X8_cls 364 448 IPR012946 -
Lan10g0979 482 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Lan10g0979 482 Pfam X8 domain 364 433 IPR012946 -
Lan10g0979 482 Gene3D Glycosidases 25 351 - -
Lan10g0979 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 458 IPR044965 GO:0004553|GO:0005975
Lan10g0979 482 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Lan10g0979 482 Gene3D - 361 458 - -
Lan10g0979 482 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0979 Lan-Chr10 14826744 14829321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0979 6 457 Glycoside Hydrolase AT4G31140 71.711 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0979 K19893 - gmx:100790297 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0979 10 14826744 14829321 Lan14g0462 14 9981173 9982921 PCT
Lan14g0782 14 14695332 14699152 Lan10g0979 10 14826744 14829321 PCT