Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0650 ATGTATAAGATATGGGAACACAATAAGAGGAACACACAACACAACACAAAGGTTGTTGTTGATCCTAGTACCAGGTTGATTGGTATGATTCCCAACACACCTTCATCATGTTTCAATCTCAATCACCATCTTCAACCTGATCACGTCGCTGTTGGTTCCCCTATTAAGAGGGTTTCTCCTCCTTCTTCATCTTCTTCTTCTAACCCTTTCTCCATTGATGGCTCTCCTTCTCCATATTCAGCTCCGTTTCTTAACGATCATTGCTTTACTAAACCCTGGTTGGACTCTGAGTCATCGTGTTTCGATGATGATCTGAAACTCTCCGACCATTTCGCTAGAATGAATATCATCGATGGAAACAAAAACATGGACTCGTCCTATGTTTGTTCTTTCGATGCAAATAATAATGATGTTGTTCCGTTTTTCAATGAAACAGGAACAACCCCATTTCAGCATTTCTGCAATGCTGGTGTTTCGGTTCCAAAAGGTTACACTTTTGGCACCCCAATTGAGTCTTATGATTGGAACACCAACCATGTATATCATCATGCCATGGAACAGAGGAAAAAACAGGGTTCACAATTTCAATTGCAAAACCCATCTTTTATTAGCAACCCTTTTCTTTATGATCCTTTTATGGGATCACAGTCACAATCACAACCTTTTGGAATGGATGTTAAAAAACCCTTTACATTTTCACAGTCTCAGATTATGCATCCCAAAATTGCTTTGAATCCTAATGCCAATGTTCCTCTTCCTCCATCACATTGTGTTCCTGCAACAAATGAAATGGAAATGGCAAAGGAAGCTGGATATTCCCAATATTTCTCTCAAAGGAGAAATGGAATTGACCCTGCATCGTGTGCATGTGAAAATAGCTTTATCCCACAAGGGAAAGACATGAAACATTGCATTGAAAATGGGAACAAATCTATGAGGTGCTACAAGAATGGTTACCATGGTGAGGTTTGTGAAAACAATGACAATAACACTTTTGCTGCTAGTGATGTCTCGCTACGGTTGCTGCTGAATTTTTACTCTCTGGCTGAGGTGCATGATTACATATACAACATGGCAAAGGATCAGAGTGGTTGTCGATTCTTGCAGCGAATGGTTGATGAAGGAACACATGAAGATATGAGAATGGTGTTTGAAGGGATAATTGAAAATGTTGTTGAGCTTATGATGGACCCTTTTGGGAATTATCTTGTGCAGAAGTTGCTTAGTGTGTGCAATGAAGACCAAAGGTTACAAATTGTTCTTATGTTGACAAATGAGCCAGGACAACTTGTACGAATCTCTTTAAATACTCACGGCACACGAGTGGTACAGAAGTTGATTGAGACACTCAACTCTGGCCAACAAATTTCATTAGTGAGGTCTGCTATACAACCAGGCTTTCTTGATCTGATTAAGGATCTGAATGGAAATCATGTTATACAACGTTGCTTGCAATGCCTCAGTTGTCAAGATAACGAGTTTATTTTTGATGCTGGCGTGAAGTTTTGTGTTGACATAGCTACTCATCGACATGGATGCTGTGTGCTGCAACGTTGCATTGATCACTCTGTGGGAAAACATCGAGATAAGCTGGTCACAGAGATTTGCAAGCATGGGCTTTTCCTCGCTCAAGATCCATTTGGAAATTATGTTGTTCAACATATTATAGAGATGGAGATTCCAACTGCTTCAACCAAAATGAATGCTCAGTTCAAAGGCAGCTATGTAAACCTCTCTACACAAAAATTTAGCAGTCATGTAGTTCAAAGATGCCTTGAGTATGTTGCAGACAGTAGATCGAGAATTGTCCGAGAATTTTTGTCTGATCCTCACTTCGAACAGTTGTTGCAAGACCCTTTTGCCAACTATGTCATTCAAACTGCTCTAGCATTCACCAAGGGTTCTCTGCATACATCTTTGGTTGAAGCAGTTCGCCAATACAAAATCTTGCGCAATAGCCCCTATTGCAAGGGGATTTTCTCAGGAAGCCTACTCAAGAAGTGA 2004 0.4017 MYKIWEHNKRNTQHNTKVVVDPSTRLIGMIPNTPSSCFNLNHHLQPDHVAVGSPIKRVSPPSSSSSSNPFSIDGSPSPYSAPFLNDHCFTKPWLDSESSCFDDDLKLSDHFARMNIIDGNKNMDSSYVCSFDANNNDVVPFFNETGTTPFQHFCNAGVSVPKGYTFGTPIESYDWNTNHVYHHAMEQRKKQGSQFQLQNPSFISNPFLYDPFMGSQSQSQPFGMDVKKPFTFSQSQIMHPKIALNPNANVPLPPSHCVPATNEMEMAKEAGYSQYFSQRRNGIDPASCACENSFIPQGKDMKHCIENGNKSMRCYKNGYHGEVCENNDNNTFAASDVSLRLLLNFYSLAEVHDYIYNMAKDQSGCRFLQRMVDEGTHEDMRMVFEGIIENVVELMMDPFGNYLVQKLLSVCNEDQRLQIVLMLTNEPGQLVRISLNTHGTRVVQKLIETLNSGQQISLVRSAIQPGFLDLIKDLNGNHVIQRCLQCLSCQDNEFIFDAGVKFCVDIATHRHGCCVLQRCIDHSVGKHRDKLVTEICKHGLFLAQDPFGNYVVQHIIEMEIPTASTKMNAQFKGSYVNLSTQKFSSHVVQRCLEYVADSRSRIVREFLSDPHFEQLLQDPFANYVIQTALAFTKGSLHTSLVEAVRQYKILRNSPYCKGIFSGSLLKK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0650 667 MobiDBLite consensus disorder prediction 52 73 - -
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 462 497 IPR001313 GO:0003723
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 570 605 IPR001313 GO:0003723
Lan14g0650 667 PANTHER PUMILIO HOMOLOG 7, CHLOROPLASTIC-RELATED 172 667 - -
Lan14g0650 667 CDD Pumilio 353 661 IPR033712 GO:0003723
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 425 460 IPR001313 GO:0003723
Lan14g0650 667 Gene3D - 342 664 IPR011989 -
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 350 385 IPR001313 GO:0003723
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 498 533 IPR001313 GO:0003723
Lan14g0650 667 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 326 667 IPR033133 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 503 536 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 429 458 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 575 597 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 355 388 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 611 631 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 390 420 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 467 497 IPR001313 GO:0003723
Lan14g0650 667 Pfam Pumilio-family RNA binding repeat 542 557 IPR001313 GO:0003723
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 606 642 IPR001313 GO:0003723
Lan14g0650 667 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 172 667 - -
Lan14g0650 667 MobiDBLite consensus disorder prediction 57 73 - -
Lan14g0650 667 SUPERFAMILY ARM repeat 348 660 IPR016024 -
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 386 422 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 498 533 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 386 421 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 350 385 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 462 497 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 607 642 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 425 460 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 570 604 IPR001313 GO:0003723
Lan14g0650 667 SMART pum_5 534 568 IPR001313 GO:0003723
Lan14g0650 667 ProSiteProfiles Pumilio RNA-binding repeat profile. 534 569 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0650 Lan-Chr14 13459640 13464754 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0650 - - aip:107608433 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0650 14 13459640 13464754 Lan14g0650 14 13459640 13464754 ECH
Lan11g0467 11 3523256 3527817 Lan14g0650 14 13459640 13464754 PCT
Lan14g0650 14 13459640 13464754 Lan11g0467 11 3523256 3527817 PCT