Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0234 ATGTCGTCTGATATGCCCAACACAGATCCTGAAGGCCTCGACGGTGTTCGTATGACATGGAACGTCTGGCCACGCTCCAAACTCGAATCCTCCAAATGCGTTATCCCACTCGCCGCCACCATCTCTTTAATCAAACCCCACCCTCATATCCCGCGTCTCCCCTACGCGCCACTCCGCTGTAAAACATGCTCATCCGTACTCAACCCCTTCTCGCGCGTCGACTTCACCGCCAAGATCTGGATCTGCCCCTTCTGCTACCAGCGCAACCACTTTCCCCCGCATTACAACGCTGTCTCTGAAACTAACCTCCCCGGCGAGCTCTACCCTCACTACACCACCGTCGAATACGTCAACCCAATTCCTGACTCTAATTCTAATCCGTTCAATCAATTTCGATCCAAATTTACTTCGCCGGTCTTTTTGTTCGTTCTTGATACTTGCATGATTGAGGAGGAGATGGAGTTTGTGAAATCGGCGTTGCGGCGCGCGATTGGGTTGTTGCCTGATAATGCGCTGGTTGGGTTTGTTTCCTTCGGGACGCAGGTTCAGGTTCATGAATTGGGGTTCTCTGATATGTCTAAAGTTTACGTTTTTCGCGGTTCCAAGGATATTCCGAAGGAACAGGTTTTGGAGCAGTTGGGGCTTGGTAGTGGGTACCAGAAAGGAAGGGTGCAAGGTGCTGCTGGTGCTGGTGCTGGTGCTGCTTTTCCGGGTACGGCGATTACAAGGTTTTTGTTGCCTTCGTCTGATTGTGAATACACTCTCAATGCGCTGTTGGATGAATTGCAATCAGACCAATGGCCCGTTCCGCCTGGGAGTCGTCCGGCTCGGTGCACCGGAGTTGCTTTGAGTGTTGCCATGGGCTTGCTTGGTGCCTGTAATCCTGGTACTGGGGCTAGAATCATTGCTTTGGTTGGAGGCCCTTGCACTGAAGGACCGGGCACGATTGTGTCCAAAGATCTATCTGACCCAGTCCGTTCTCATAAAGATCTTGATAAAGATGTAGCACCATACTTTAAGAAAGCAGTCAAATTTTATGAGTCTCTTGCAAAACAGCTAGTTAGTCAGGGTCACGTTTTAGATCTCTTTGCATCAGCGCTTGATCAGGTTGGAGTTTCAGAAATGAAAGTTGTGGTTGAAAGAACTGGTGGTCTTGTTATCCTGGCTGAAAGTTTCGGCCATTCAGTCTTCAAGGACTCTTTTAAGCGTATTTTTGAGGTTGGGGAGCAATCTCTTGGTCTTTGTTTCAATGGAACCCTTGAGATAAATTGCTCAAAAGAAATTAAAATTCAGGGAATAATTGGACCTTGCACGTCATTGGAAAAGAAAGGTCCTTCTGTTGCTGATACTGTTATAGGAGAGGGTAATACAACAGCATGGAAGATGTGTGGTCTTGACAAGAGTACTTGCTTGACTGTGATGTTCGATCTTTCATCAAATGATCGTTCAAACACGCCAGGTGCTGTCAATCCACAGTTGTACCTGCAGTTCCTTACAAGTTATCAGGGCCCAGATGGTCAATCTGTGCTTCGTGTCACAACAGTAACTAGAAGATGGGTAGATAGTTCTGTTAGTTCCGAGGAATTGGTTCAAGGATTTGACCAAGAAACTGCTGCAGTGGTAATGGCTAGATATGCTTCTCTGAAAATGGAGACTGAGGAAACATTTGATGCTACACGGTGGTTGGACCGGCTCCTCATTCGCCTCTGTTCTAAGTTTGGTGACTACCGCAAGGATGATCCATCATCTTTTACATTAAACCCATCCTTTTCATTGTTCCCCCAGTTTATGTTCAATCTGAGACGATCACAGTTTTTACAGGTTTTTAACAACAGTCCAGATGAGACTGCCTACTTCCGCATGATGTTAAACAGAGAAAATATTAGTAACGCTGCTGTCATGATTCAGCCATCTTTAATTTCGTATTCATTTAATTCACCGCCTGCACCAGCATTGTTAGATGTGGCTTCCATTGCCGCAGATCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTAATTTTTCATGGGATGACGATAGCTCAATGGCGCAACTTGGGTTACCAGAACCAACCGGAACACCAGGCATTTGCACAACTATTACAAGCTCCACATGATGATGCCCAAATGATAGTTGGAGAACGGTTCCCTGTTCCTAGATTGGTAGTGTGTGATCAACATGGTTCCCAGGCTAGATTTTTGTTAGCAAAGCTGAACCCGTCAGCAACATACAATAGCGCACACGAGATGACAGCTGGTTCTGATGTAATCTTCACTGATGATGTGAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA 2337 0.4634 MSSDMPNTDPEGLDGVRMTWNVWPRSKLESSKCVIPLAATISLIKPHPHIPRLPYAPLRCKTCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAVSETNLPGELYPHYTTVEYVNPIPDSNSNPFNQFRSKFTSPVFLFVLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKDIPKEQVLEQLGLGSGYQKGRVQGAAGAGAGAAFPGTAITRFLLPSSDCEYTLNALLDELQSDQWPVPPGSRPARCTGVALSVAMGLLGACNPGTGARIIALVGGPCTEGPGTIVSKDLSDPVRSHKDLDKDVAPYFKKAVKFYESLAKQLVSQGHVLDLFASALDQVGVSEMKVVVERTGGLVILAESFGHSVFKDSFKRIFEVGEQSLGLCFNGTLEINCSKEIKIQGIIGPCTSLEKKGPSVADTVIGEGNTTAWKMCGLDKSTCLTVMFDLSSNDRSNTPGAVNPQLYLQFLTSYQGPDGQSVLRVTTVTRRWVDSSVSSEELVQGFDQETAAVVMARYASLKMETEETFDATRWLDRLLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFLQVFNNSPDETAYFRMMLNRENISNAAVMIQPSLISYSFNSPPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLQAPHDDAQMIVGERFPVPRLVVCDQHGSQARFLLAKLNPSATYNSAHEMTAGSDVIFTDDVSLQVFFEHLQRLAVQS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0234 778 Gene3D - 54 113 - -
Lan14g0234 778 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 777 IPR037364 -
Lan14g0234 778 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 637 777 IPR036180 -
Lan14g0234 778 Pfam Sec23/Sec24 zinc finger 57 95 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lan14g0234 778 Pfam Sec23/Sec24 helical domain 534 630 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lan14g0234 778 Gene3D von Willebrand factor, type A domain 137 414 IPR036465 -
Lan14g0234 778 Pfam Gelsolin repeat 647 734 IPR007123 -
Lan14g0234 778 Gene3D Severin 636 740 IPR029006 -
Lan14g0234 778 CDD Sec23_C 626 746 IPR037550 GO:0030127|GO:0090114
Lan14g0234 778 SUPERFAMILY vWA-like 138 406 IPR036465 -
Lan14g0234 778 Pfam Sec23/Sec24 trunk domain 137 405 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lan14g0234 778 SUPERFAMILY beta-sandwich domain of Sec23/24 9 533 - -
Lan14g0234 778 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 777 - -
Lan14g0234 778 Pfam Sec23/Sec24 beta-sandwich domain 416 520 IPR012990 -
Lan14g0234 778 Gene3D Sec23/Sec24 helical domain 531 775 - -
Lan14g0234 778 Gene3D - 11 517 - -
Lan14g0234 778 SUPERFAMILY Helical domain of Sec23/24 534 636 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lan14g0234 778 SUPERFAMILY Zn-finger domain of Sec23/24 48 119 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0234 Lan-Chr14 2606080 2613477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0234 K14006 - gmx:100813940 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0020 15 131912 139173 Lan14g0234 14 2606080 2613477 LSH