Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0196 ATGGGTGCTGCGGGCTCTAAGCTCGAGAAAGCTCTTGGTGATCAATTTCCTGAAGGAGAACGTTATTTTGGTTTTGAGAATTTCGGCAATACTTGTTATTGCAATAGCGTTTTGCAGGCACTATACTTCTGCGTTCCATTTCGTGAACAGTTGCTAGAGTATTATGGAAGCAACAAAAGTATAGCTGATACAGAGGAAAATCTTTTGACTTGCTTAGCTGACTTATTTTCGCAGATAAGTTCCCAGAAGAAAAAAACAGGTGTCATTGCTCCCAAACGATTTGTACAGAGGTTGAGAAAACAGAATGAACTCTTCCGTAGCTATATGCACCAGGATGCCCATGAATTCTTGAACTTTTTGTTAAATGAACTTGTCGACATTCTGGAGAAAGAGGACCAGGCTGCAAAAAATGATGAGGAGACATCACCACCTTCTGAAAAAGTAGCAAATGGGCCTAAGAATTGTCTAGCTAACGGTGCTAAAAAGGAGCCTTTAGTTACATGGGTGCACAAAAACTTTCAGGGAATACTCACCAACGAGACAAGATGCTTGCAATGTGAAACAGTGACAGCTAGGGATGAAACATTTTTTGACTTGAGCCTTGATATTGAACAAAACAGTTCAATTACAAGCTGTTTGAAAAACTTCAGTTCAACTGAGACGTTGAATGCCGAAGACAAATTTTTTTGTGACAAGTGTTGCAGTTTGCAAGAAGCTCAGAAGAGGATGAAGATAAAGAAACCGCCTCACATCTTGGTCATCCACCTTAAGCGTTTTAAGTACATTGAGCAGCTGGGACGCTACAAGAAGCTCTCCTACCGAGTTGTCTTCCCCCTCGAGCTGAAGTTGAGTGATACCGTTGAAGAAGCAGACATCGAGTATTCCTTATTTGCAGTAGTTGTCCATGTCGGGAGTGGACCCAACCATGGGCACTATGTCAGCCTCGTGAAAAGCCATAACCACTGGCTATTTTTTGACGACGAAAACGTGGAGATGATTGACGAGTCTGCTATTCAAACATTCTTTGGGTCATCACAAGAATACTCCAGTAATACAGACCATGGTTACATTTTGTTCTATGAGAGCATTAGCAACAAGAACTAG 1104 0.4158 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYGSNKSIADTEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLRKQNELFRSYMHQDAHEFLNFLLNELVDILEKEDQAAKNDEETSPPSEKVANGPKNCLANGAKKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSDTVEEADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAIQTFFGSSQEYSSNTDHGYILFYESISNKN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0196 367 MobiDBLite consensus disorder prediction 133 153 - -
Lan14g0196 367 SUPERFAMILY Cysteine proteinases 21 361 IPR038765 -
Lan14g0196 367 CDD Peptidase_C19G 24 361 - -
Lan14g0196 367 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 24 39 IPR018200 GO:0004843|GO:0006511
Lan14g0196 367 Gene3D Cysteine proteinases 5 362 - -
Lan14g0196 367 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 23 363 IPR028889 -
Lan14g0196 367 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 1 365 - -
Lan14g0196 367 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 294 312 IPR018200 GO:0004843|GO:0006511
Lan14g0196 367 Pfam Ubiquitin carboxyl-terminal hydrolase 23 360 IPR001394 GO:0004843|GO:0016579
Lan14g0196 367 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0196 Lan-Chr14 2354465 2359885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0196 24 334 Miscellaneous Gene Families AT4G31670 26.332 1.17e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0196 K11842 - gmx:100305765 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0060 15 380900 386474 Lan14g0196 14 2354465 2359885 LSH