Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0161 ATGGCCGCCGCCGCCGCCGCTCCCATTTCCATGCGCGAAACTCTCACCTTACCGAGTGTTGGAATAAATCCACAGTTTATGACGTTCATGCACGTGACGATGGAGTCTGATAAGTATATATGCGTTCGAGAAACGTCTCCACAGAATAGCGTCGTTATTATTGATATGAACATGCCGACGCAACCTTTGAGGAGGCCTATCACTGCAGATTCTGCTATTATGAATCCTAATTCTAGAATCCTTGCTTTGAAAGCCCATCTCCAAGGGACGACACAAGATCACCTGCAAATATTTAATATTGAGATGAAAGCAAAGGTGAAATCGTATCAGATGCCTGAGCAGGTAGTCTTTTGGAAGTGGATTAGCCCCAAGTTGTTGGGTCTTGTGACACAGACCTCTGTATACCATTGGTCAATTGAAGGTGAATCTGAACCTGTGAAGATGTTTGAGAGAACAGCAAATTTGGCAAACAATCAGATAATTAATTATCGATGTGACCCTACAGAAAAGTGGTTGGTCTTGATTGGTATCGCTCCTGGTTCCCCTGAGAGGCCACAATTGGTTAAAGGAAACATGCAACTCTTCTCTGTTGATCAACAGCGTAGTCAGGCTCTTGAAGCACATGCAGCAGCATTTGCTCAATTTAAGGTTCCTGGAAATGAAAATCCTTCTGTTTTGATTTCTTTTGCCACAAAGACGCTTAATGCTGGTCAAATTATATCCAAGTTGCATGTTATTGAGATGGGTGCACAGCCAGGGAAGCCATCATTTACGAAGAAACAAGCAGATCTTTTCTTTCCCCCAGATTTTGCTGATGACTTTCCAGTTGCCATGCAGATATCTCACAAATACAGTTTGATATATGTGATTACCAAACTTGGTCTCTTGTTCGTCTATGATTTGGAGACAGCTACCGCAGTATATAGGAATAGAATAAGTCCAGATCCTATATTTTTGACATCAGAAGCTACATCATCAGGGGGCTTTTATGCAATTAACAGGAGAGGTCAGGTGTTATTGGCTACTGTTAATGAACAAACCATCGTGAATTTTGTCAGTGGCCAATTAAACAATTTGGAACTAGCCGTTAATCTAGCCAAGAGAGGAAATCTTCCTGGTGCTGAACAGCTGGTAGTGGAACGCTTCCATGAACTGTTTGCCCAAACGAAGTATAAAGAAGCAGCTGAGCTTGCTGCTGAGTCTCCACAAGGAATCCTTCGCACGCCTGATACAGTTGCAAAATTTCAGAGTGTTCCTGTTCAAGCTGGGCAAACTCCTCCACTATTGCAGTTCTTTGGAACACTTTTAACAAGAGGAAAGCTGAATGCCTTTGAGTCATTGGAATTGTCACGACTGGTTGTGAACCAGAACAAGAAAAATCTTTTGGAGAATTGGTTGGCAGAGGACAAGCTTGAATGCAGTGAGGAGCTAGGAGATCTTGTAAAGACTGTGGACAATGATCTTGCTTTAAAAATATATATAAAAGCCAGAGCTACCCCAAAAGTTGTTGCTGCTTTTGCTGAGAGAAGGGAATTCGATAAAATCTTGATATACTCTAAGCAGGTTGGGTACACGCCTGACTATCTCTTCCTTCTGCAAACGATTCTCCGGACAGATCCTCAGGGTGCTGTTAATTTTGCCTTAATGATGTCTCAAATGGAGGGAGGTTGCCCAGTTGACTACAACACCATAACTGATCTGTTTCTTCAGAGAAACTTGATCCGTGAGGCTACTGCCTTTCTCCTAGATGTTTTGAAGCCAAATCTACCTGAACATGGGTTCCTTCAAACAAAGGTGTTGGAGATAAATCTGGTAACTTTCCCCAATGTTGCTGATGCAATTTTAGCTAATGGCATGTTCAGCCATTATGACCGTCCACGTATTGCCCAACTTTGTGAAAAAGCTGGTCTTTATGTGCGAGCTTTACAACACTACACAGAGTTGCCAGATGTAAAACGTGTGATTGTAAATACCCATGCAATTGAACCACAGTCACTTGTTGAATTTTTTGGTACTCTGTCTCGAGAATGGGCATTAGAGTGCATGAAGGACCTATTGCTGGTCAACCTTCGAGGAAATCTGCAGATAATTGTGCAAGTTGCTAAAGAATATTGTGAACAATTGGGTGTTGATGGTTGCATAAAACTTTTTGAGCAGTTCAAGTCATATGAAGGACTGTATTTTTTCCTTGGATCATATTTGAGCTCCAGTGAGGATCCTGATATTCACTTTAAGTACATTGAGTCAGCCGCAAAGACTGGACAAATCAAAGAGGTCGAGCGTGTGACTAGAGAATCAAGTTTTTATGATCCCGAGAAGACGAAAAACTTTCTAATGGAAGCTAAGCTTCCAGATGCACGACCTCTGATTAATGTTTGTGACCGTTTTGGATTTGTTCCAGATCTAACACACTATCTATACACAAGCAACATGCTTCGCTACATTGAAGGTTATGTTCAGAAGGTGAACCCAGGGAATGCTCCTTTAGTTGTTGGGCAGCTGCTAGATGATGAGTGTCCAGAAGATTTTATCAAAGGCTTGATTCTTTCTGTTCGTTCATTACTGCCAGTGGAGCCCCTTGTGGAAGAATGTGAGAAGAGGAATCGCCTTCGCTTGCTCACACAGTTCTTGGAACATCTTGTATCTGAGGGAAGCCAGGATGTACATGTTCACAATGCACTGGGTAAAATCATCATTGATAGCAACAACAACACAGAGCATTTTCTCACTACCAACCCATACTACGATTCTCGAGTTGTGGGCAAATATTGTGAGAAACGTGACCCCACCTTGGCAGTTGTAGCTTACAGGCGAGGGCAATGTGATGATGAACTTATCAATGTCACGAACAAAAATTCTTTGTTCAAACTACAAGCAAGATATGTTGTGGAGAGGATGGATGGTGATCTTTGGGAGAAAGTTCTTGTCCCTGATAATGCCTACAGAAGACAACTTATTGATCAGGTTGTATCTACTGCTCTGCCGGAAAGCAAGAGCCCTGAACAAGTTTCTGCAGCTGTTAAGGCTTTCATGACTGCTGATCTACCTCATGAATTGATTGAGCTTCTTGAGAAGATCGTGCTTCAGAATTCTGCATTTAGTGGGAACTTTAATTTGCAGAATCTGCTTATTTTGACAGCAATAAAGGCTGATTCATCCAGAGTTATGGATTATGTTAATAGACTGGATAATTTTGATGGGCCTGCAGTTGGAGACATGGCTGTTGAAGCTCAGCTATATGAAGAAGCATTTGCAATATTCAAGAAGTTCAACTTAAATGTTCAAGCAGTCAATGTCTTGCTAGATAATATTCATAGCATTGGTAGGGCTGTGGAGTTTGCTTTCCGAGTTGAAGAAGATGCTGTTTGGAGTCAGGTGGCCAAGGCTCAACTCAGGGAAGGATTAGTAAGTGATGCAATTGAGTCATTTATACGAGCAGATGATGCCACCCAATTCTTGGATGTTATACGTGCCTCTGAAGATGCCAATGTTTACCATGACTTGGTGAGATACTTGCTGATGGTAAGGCAGAAGTCAAAAGAACCCAAGGTGGACAGTGAGCTTATTTATGCGTATGCGAAGATTGACAGGCTTAGTGACATTGAGGAGTTCATTCTTATGCCAAATGTGGCCAATCTGCAAAATGTTGGTGACCGATTGTATGATGAAGAACTATATGAGGCTGCAAAAATTTTATATGCTTTTATATCTAACTGGGCCAAGTTAGCAGTCACCCTTGTGAAGTTGAAACAGTTCCAAGGTGCTGTTGATGCGGCAAGGAAAGCTAACAGCGCAAAAACATGGAAAGAAGTTTGCTTTGCATGTGTTGATGCAGAGGAGTTCCGTTTGGCCCAGATATGTGGACTCAACATTATTGTTCAGGTGGATGATTTGGAAGAGGTCAGTGAATATTACCAAAATAGAGGTTGCTTCAATGAGCTAATATCCCTCATGGAGAGTGGTTTAGGATTAGAACGAGCACATATGGGCATCTTCACTGAGTTAGGAGTTCTGTATGCTAGATACCGGCCTGAGAAGCTTATGGAGCATATCAAACTATTTGCCACCCGACTCAATATTCCTAAACTCATAAGAGCTTGTGATGAACAACAGCATTGGAAGGAACTGACCTATTTGTATATCCAATATGACGAGTTTGATAATGCTGCAACAACCATTATGAACCATTCCCCTGAAGCATGGGATCACATGCAATTCAAAGATGTTATTGCCAAAGTTGCTAATGTGGAGTTGTATTACAAGGCTGTTCACTTCTATTTGCAAGAGCATCCAGATCTTATCAATGATGTTCTGAATGTCCTTGCACTTCGTGTTGATCATGCACGTGTTGTTGACATCATGCGAAAGGCTGGTCACCTCCGCCTTGTCAAGCCATACATGGTCGCAGTTCAGAGCAACAACGTGTCGGCTGTTAATGAAGCGTTGAATGAAATATATGTTGAGGAGGAAGACTATGATAGATTGCGTGAGTCAATTGATTTGCATGATAACTTTGATCAAATTGGCCTTGCACAGAAGATTGAAAAGCATGAGCTTCTTGAGATGAGACGTGTTGCTGCTTATATTTACAAGAAGGCCGGTAGGTGGAAGCAGTCCATCTCCTTGTCAAAGAAGGATAACCTTTACAAAGATGCCATGGAGACGGCCTCTCAATCTGGTGAACGGGAACTTGCGGAGGAGTTGCTCGTTTATTTCATTGATCAGGGAAAGAAGGAATGTTTTGCCTCATGTCTATTTGTTTGCTATGATTTGATCCGAGCAGATGTCGTTCTTGAATTGGCTTGGATGCACAACATGATCGACTTTGCCGTCCCATATCTCTTACAGTTTATCCGTGAGTACACTGGCAAAGTTGATGAACTGGTGAAGGACAAAATTGAAGCACAGATCAATGAGAAGACTAAAGAAAAAGAAGAAAAGGAAGTCATTGCACAGCAGAATATGTATGCTCAATTGTTGCCGCTTGCTTTGCCTGCACCACCAATGCCTGGAACGGGAGGAGGCTTTGCCCCTCCCCCTCCAATGGGTGGAGGCTTTGCTCCTCCACCTCCAATGGGTGGTGGATTTGGGATGCCACAAATGCCTCCTTATGGCATGCCACCCACGGGCAGCAGCTACTGA 5142 0.4251 MAAAAAAPISMRETLTLPSVGINPQFMTFMHVTMESDKYICVRETSPQNSVVIIDMNMPTQPLRRPITADSAIMNPNSRILALKAHLQGTTQDHLQIFNIEMKAKVKSYQMPEQVVFWKWISPKLLGLVTQTSVYHWSIEGESEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGSPERPQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKVPGNENPSVLISFATKTLNAGQIISKLHVIEMGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSSGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVNLAKRGNLPGAEQLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQAGQTPPLLQFFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDVKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDGCIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIESAAKTGQIKEVERVTRESSFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNTEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWEKVLVPDNAYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYVNRLDNFDGPAVGDMAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIHSIGRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLDVIRASEDANVYHDLVRYLLMVRQKSKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEELYEAAKILYAFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVIAKVANVELYYKAVHFYLQEHPDLINDVLNVLALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSISLSKKDNLYKDAMETASQSGERELAEELLVYFIDQGKKECFASCLFVCYDLIRADVVLELAWMHNMIDFAVPYLLQFIREYTGKVDELVKDKIEAQINEKTKEKEEKEVIAQQNMYAQLLPLALPAPPMPGTGGGFAPPPPMGGGFAPPPPMGGGFGMPQMPPYGMPPTGSSY* 1714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0161 1713 SUPERFAMILY ARM repeat 1197 1532 IPR016024 -
Lan14g0161 1713 SMART CLH_2 994 1139 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SMART CLH_2 848 987 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SMART CLH_2 1438 1597 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SMART CLH_2 1289 1435 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SMART CLH_2 1143 1284 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SMART CLH_2 701 843 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SMART CLH_2 552 694 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 PANTHER CLATHRIN HEAVY CHAIN RELATED 3 1691 - -
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 848 987 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 552 698 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Clathrin-H-link 370 435 - -
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1438 1581 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 1441 1580 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 558 691 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 851 975 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 994 1132 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 1290 1432 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 1148 1282 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Region in Clathrin and VPS 702 841 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1289 1435 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 SUPERFAMILY Clathrin heavy-chain terminal domain 7 344 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 994 1139 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 Pfam Clathrin propeller repeat 155 198 IPR022365 -
Lan14g0161 1713 Pfam Clathrin propeller repeat 21 57 IPR022365 -
Lan14g0161 1713 PANTHER CLATHRIN HEAVY CHAIN 3 1691 - -
Lan14g0161 1713 PIRSF CHC 4 1676 IPR016341 GO:0016192|GO:0032051|GO:0071439
Lan14g0161 1713 Coils Coil 1478 1498 - -
Lan14g0161 1713 SUPERFAMILY ARM repeat 902 1067 IPR016024 -
Lan14g0161 1713 Pfam Clathrin, heavy-chain linker 345 368 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Lan14g0161 1713 Gene3D - 1 378 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Lan14g0161 1713 SUPERFAMILY ARM repeat 346 501 IPR016024 -
Lan14g0161 1713 SUPERFAMILY ARM repeat 1052 1196 IPR016024 -
Lan14g0161 1713 Coils Coil 1630 1650 - -
Lan14g0161 1713 MobiDBLite consensus disorder prediction 1684 1706 - -
Lan14g0161 1713 Gene3D Tetratricopeptide repeat domain 1198 1537 IPR011990 GO:0005515
Lan14g0161 1713 Gene3D Tetratricopeptide repeat domain 902 1057 IPR011990 GO:0005515
Lan14g0161 1713 Gene3D Tetratricopeptide repeat domain 1058 1197 IPR011990 GO:0005515
Lan14g0161 1713 MobiDBLite consensus disorder prediction 1684 1713 - -
Lan14g0161 1713 SUPERFAMILY ARM repeat 458 794 IPR016024 -
Lan14g0161 1713 Gene3D - 1543 1639 - -
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 701 843 IPR000547 GO:0006886|GO:0016192
Lan14g0161 1713 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1143 1284 IPR000547 GO:0006886|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0161 Lan-Chr14 2017280 2028617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0161 K04646 - gmx:547986 3143.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0111 15 761818 772776 Lan14g0161 14 2017280 2028617 LSH
Lan14g0161 14 2017280 2028617 Lan11g0238 11 1511212 1524334 PCT
Lan11g0238 11 1511212 1524334 Lan14g0161 14 2017280 2028617 PCT