Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0116 ATGAAGATAATTCTTATCAACTTCTTCATCTTATCTCTTCTCTCCTTCACACATGCTTCAGTAGTAGATTTCTGTGTAGCAGATTACACAGTTCCAAATGGTCCTGCAGGATACTCATGCAAGAAGCCTAAAACTGTTACAGTAGATGATTTTGTTTACCATGGCCTCAGTGTTTCTGGTAACACCTCAAATATTATCAATGCTGCAGTTTCTCCTGCATTTGATGCACAATTCCCTGGTGTTAATGGCCTTGGAATTTCCATTGCACGTTTAGATTTATCAGTTGGTGGAGTTATACCACTTCATACACATCCTGGTGCATCAGAAATACTTGTTGTAGTGCAAGGAACAATCTCTGCTGGATTTGTTGCATCTGATAACACTGTCTACCTTAAAACTCTCAAAAGTGGAGACATTATGGTATTCCCTCAAGGCTTGTTGCACTTTCAAGTCAATGGTGGTGGTTCTAAGGCTTTGGCTTTTGTGAGTTTCAGTAGTGCAAATCCTGGTCTTCAAATATTGGATTTTGCTTTGTTCAAAAGTGATTTTCCTACTCCATTGATAACAGCAACTACTTTTCTTGATGCTGCTGTGGTGAAGAAGCTTAAGGGTGTTCTTGGAGGCTCAGGTTAA 633 0.3949 MKIILINFFILSLLSFTHASVVDFCVADYTVPNGPAGYSCKKPKTVTVDDFVYHGLSVSGNTSNIINAAVSPAFDAQFPGVNGLGISIARLDLSVGGVIPLHTHPGASEILVVVQGTISAGFVASDNTVYLKTLKSGDIMVFPQGLLHFQVNGGGSKALAFVSFSSANPGLQILDFALFKSDFPTPLITATTFLDAAVVKKLKGVLGGSG* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0116 210 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 8 206 - -
Lan14g0116 210 SUPERFAMILY RmlC-like cupins 21 203 IPR011051 -
Lan14g0116 210 Gene3D Jelly Rolls 18 209 IPR014710 -
Lan14g0116 210 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Lan14g0116 210 PRINTS Germin signature 132 152 IPR001929 GO:0030145
Lan14g0116 210 PRINTS Germin signature 165 180 IPR001929 GO:0030145
Lan14g0116 210 CDD cupin_OxOx 18 206 - -
Lan14g0116 210 Pfam Cupin 56 197 IPR006045 -
Lan14g0116 210 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
Lan14g0116 210 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 8 206 - -
Lan14g0116 210 SMART Cupin_1_3 54 200 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0116 Lan-Chr14 1462902 1463577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0116 1 209 Miscellaneous Gene Families AT5G20630 66.190 1.90e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0116 - - gmx:100806553 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0174 15 1875663 1876633 Lan14g0116 14 1462902 1463577 LSH