Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1214 ATGACTCAACTTCGCTTTCCCCCTCTCTCTCCTCACTTTTATCACTCTCTCTCTCAACAAAACAACAATAACAATAACACACTTTCTCTTCCTTTTCCATCTTCTTCTTGTTCATCTCAAAAGTTCCACCTTCACAACAACAACAACCCATCTCGCCTTTCCTCCCAAAGTTTCAAACTTCACTCTTCCTCCGCCGCTGGAGGCAACAATGGCGGAGGAACCAGCGGAGGCAACAATAGTGGCGGCGATCATAACAATGATGAAAATTCCAATGACCCATCGTCAAATTTGTCAAGTTTTGGAATATTGGGTCTATTTGTAGAAGGATGGAGATCAAGGGTAGGAGCAGATCCACAGTTCCCATTCAAGGTTCTAATGGAAGAGCTTGTTGGTGTACCTGCTTGTATTGTTGGTGACATGGCATCACGCCCCAACTTTGGTTTTAACGAACTTGATCTAGTTTTGTCAACCTTAGTTGTTGGATCAATCATCAGTTTCACAGTCATGTATCTCTTAGCACCAACACCTTCTATTTCTTCAACAACCTTGCCTTCTATCTTTGCCACTTCTCCAAAAAGTCACATGTTTGAACCTGGTCTATTCTCTCTTATGGACCGCTTTGGAACTTTGGTTTACAAAGGTTCTATTCTTGCTGTTGCTGGTTTAGCTGCTGGGCTTGTTGGGACTCTACTCTCAAATGGGTTGACCAAAATGAGGGTAAAATTGGAAGAGAATGTGGGACCCACTAAGAAGTCACCACCTATTGTTTTGAATGCTTTGACTTGGGCTGCACATATGGGAATTAGTACTAATTTGAGATACCAGAGTTTGAATGGTATTGAGTTTGTGTTGGAGAGAGGGCTTAGTCCATCGGTTTTCAAGAGTTGTGTGTTGGTGCTAAGGGTATTGAACAATGTGCTTGGAGGAATGTCTTTTGTGGTGTTGGCTAGGTTGACTGGTGCACAAAGTGTTGGGGAACAAGACAAAAAGGTTGTCCAAGTTGGTGGTCCAGAGGAGAATCATAATAATCAGTCAACATCAAACTGA 1047 0.426 MTQLRFPPLSPHFYHSLSQQNNNNNNTLSLPFPSSSCSSQKFHLHNNNNPSRLSSQSFKLHSSSAAGGNNGGGTSGGNNSGGDHNNDENSNDPSSNLSSFGILGLFVEGWRSRVGADPQFPFKVLMEELVGVPACIVGDMASRPNFGFNELDLVLSTLVVGSIISFTVMYLLAPTPSISSTTLPSIFATSPKSHMFEPGLFSLMDRFGTLVYKGSILAVAGLAAGLVGTLLSNGLTKMRVKLEENVGPTKKSPPIVLNALTWAAHMGISTNLRYQSLNGIEFVLERGLSPSVFKSCVLVLRVLNNVLGGMSFVVLARLTGAQSVGEQDKKVVQVGGPEENHNNQSTSN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1214 348 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 62 338 - -
Lan13g1214 348 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 62 338 - -
Lan13g1214 348 MobiDBLite consensus disorder prediction 39 94 - -
Lan13g1214 348 Pfam Protein RETICULATA-related 113 280 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1214 Lan-Chr13 17729044 17730404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1214 - - gmx:100798978 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g1214 13 17729044 17730404 Lan12g0141 12 1621632 1623163 PCT
Lan12g0141 12 1621632 1623163 Lan13g1214 13 17729044 17730404 PCT