Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0141 ATGGCAGCCCTAGTTCAAGTTCGTTTTTGTCCTCTCTCTGGTCACTACCGTTCTTCCATTTTGCCACGTCACCACAACCCTTCCTCTCTTTCTCTCTCCACCAAACCTAACACCCACCGTTTCCCTCTCTCCTTCGCCATTGGTGGCGGTGGAAATGGAAGCAGCGGCGGCGCCGGAAATGGAGGACACGGTGGCGATTCTGGAAAATCAGGAGATTCAAATGATGATGATGATTCTGCTGGTGCTGGTGCTGGATTTGGTTTGTTAAGTATATTCCTAAACGGATGGAGATCAAGGGTTGCTGCTGATCCACAATTTGCTTTCAAAGTATTAATGGAAGAGTTGGTTGGTGTAAGTGCTTGTGTCATCGGTGATATGGCTACAAGACCTAATTTCGGACTCAATGAACTTGATTTCGTATTCTCAACCCTAGTTGTTGGATGCATCCTCAACTTCACACTCATGTATCTCCTCGCGCCGACGCTCTCGCTCACCTCCTCCTCACTGCCTGGAATCTTTGCCAATTCCCCCACCAGTCACATGTTCCAGCCCGGTACTTATAACCTTTTAGACCGCTTTGGTACTCTAATTTACAAAGGAGCTCTTTTCGCTGGTGTTGGTTTCGCTGCTGGCCTTGTTGGGACTGCCATCTCTAACGGCTTGATTGCTGTCAGGAAGAAGATGGATCCTGATTTCGAGACACCTAACAAGGCTCCGCCGACTCTGTTGAATGCGCTCACTTGGGCTGCTCACATGGGTGTTAGTAGCAACCTCCGATACCAGACACTCAACGGTGTTGAATTTGTGTTGGAGAAAGGGCTGCCTCCATTGGCGTTCAAGTCGTCCGTGTTTGTGCTCAGGCTGTTGAACAATGTGCTTGGAGGGATGACTTTTGTCGTGTTGGCAAGGTACACAGGATCACAGAGTGTTGGGGAGCAAAAGCCTGTTGTTGCTGTTGAGAAGGAGAAGTTGGTGATCCGGGAAGACGATTTTCAGGATAATAATCAGTCACCTTCAAAGTGA 1023 0.4868 MAALVQVRFCPLSGHYRSSILPRHHNPSSLSLSTKPNTHRFPLSFAIGGGGNGSSGGAGNGGHGGDSGKSGDSNDDDDSAGAGAGFGLLSIFLNGWRSRVAADPQFAFKVLMEELVGVSACVIGDMATRPNFGLNELDFVFSTLVVGCILNFTLMYLLAPTLSLTSSSLPGIFANSPTSHMFQPGTYNLLDRFGTLIYKGALFAGVGFAAGLVGTAISNGLIAVRKKMDPDFETPNKAPPTLLNALTWAAHMGVSSNLRYQTLNGVEFVLEKGLPPLAFKSSVFVLRLLNNVLGGMTFVVLARYTGSQSVGEQKPVVAVEKEKLVIREDDFQDNNQSPSK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0141 340 MobiDBLite consensus disorder prediction 54 77 - -
Lan12g0141 340 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 41 336 - -
Lan12g0141 340 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 41 336 - -
Lan12g0141 340 Pfam Protein RETICULATA-related 99 266 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0141 Lan-Chr12 1621632 1623163 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0141 - - qsu:112016977 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g1214 13 17729044 17730404 Lan12g0141 12 1621632 1623163 PCT
Lan12g0141 12 1621632 1623163 Lan13g1214 13 17729044 17730404 PCT