Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1051 ATGGCACCACCACCTTCACTTCTCTTCTTTCTTCTCCTCACACTCTTCATTACTATAACCTCTTCCCAAACCCAAAAATGCACCACACAAAAACCCACCATCCCAAAAACCAACACCTTCTATTCACACTGCATAGACCTACCATACCTCAAATCATTCATTCACTACACTTACAACCCTTCAAACTCATCTCTCTCAGTTGCATTCATAGCTTCAGTTCCACCACCTTCTGGTTGGGTTTCATGGGGACTTAACCCAACAGAAACTGGCATGGCAGGTACACAAGCCATTGCAGCATATAGCATAGATGGTGTTGTGAAAATCAAGACCCTTGACATAAAATCTTATAAGGTTCTTGTTCCTGGGAAGTTGTCGTACGAGGTATGGGATTTGAGTGCAGAACAAAGTGGTGGGTTGATAAGGATATATGCAACGTTTAAGGTTCCAAAAGGGAATGGCAATGAGGTGAATCAAGTGTGGCAGGTGGGGCCATCTGTTACTAATGGAAAGTTGGATGTTCATGGGTTTGCATCTGAGAATTTGAATGCTAAGGGGAAATTGAATTTGAGTGGAGGACAAGGTTTTATTGGTGGTGGGGTAGATTCCAGAACCAAGAACAAGAATATTCATGGTATACTAAATGCTGTGAGTTGGGGTGTTCTGTTTCCCCTTGGAGTGATCATAGCAAGGTATGTGAAGACATTCCCATCTGCCGATCCAGCTTGGTTCTATCTTCATGTTGGATGCCAGTTATCGGCTTACGCCATTGGGGTTGCTGGCTGGGCAACTGGTCTTAAACTCGGGAGCCAATCGGCTGGGATTACATATAGTCTTCATCGCAACATTGGAATCGCTCTCTTTACACTTGCCACTATACAGATTTTCGCATTGTTCCTAAGGCCAGCAAAGGATCACAAATTTCGATTTTACTGGAATATCTATCACCATAGCTTCGGATACGCAATAGTTATCATGAGTCTTATCAATATATTCAAGGGCTTCGACATCTTGCTGCCCGAAAAGAGATGGAAAACAGCATACATTGGAGTGATTGCGGCGCTCGGCGTAATTGCCGTATTGTTAGAGGTTATAACATGGATTGTTGTCTTGAAGAGAAAGTCTAAAAAGACAAACAACACTTATGATGAACACAACCACAATGGAGATAACAGGGAACACCCATTTAACATGTAA 1194 0.4271 MAPPPSLLFFLLLTLFITITSSQTQKCTTQKPTIPKTNTFYSHCIDLPYLKSFIHYTYNPSNSSLSVAFIASVPPPSGWVSWGLNPTETGMAGTQAIAAYSIDGVVKIKTLDIKSYKVLVPGKLSYEVWDLSAEQSGGLIRIYATFKVPKGNGNEVNQVWQVGPSVTNGKLDVHGFASENLNAKGKLNLSGGQGFIGGGVDSRTKNKNIHGILNAVSWGVLFPLGVIIARYVKTFPSADPAWFYLHVGCQLSAYAIGVAGWATGLKLGSQSAGITYSLHRNIGIALFTLATIQIFALFLRPAKDHKFRFYWNIYHHSFGYAIVIMSLINIFKGFDILLPEKRWKTAYIGVIAALGVIAVLLEVITWIVVLKRKSKKTNNTYDEHNHNGDNREHPFNM* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1051 397 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 381 - -
Lan13g1051 397 CDD DOMON_CIL1_like 41 190 IPR045265 -
Lan13g1051 397 Pfam Eukaryotic cytochrome b561 210 334 IPR006593 -
Lan13g1051 397 SMART 561_7 209 334 IPR006593 -
Lan13g1051 397 Pfam Protein of unknown function (DUF568) 91 189 IPR045265 -
Lan13g1051 397 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 8 381 - -
Lan13g1051 397 Gene3D - 189 381 - -
Lan13g1051 397 MobiDBLite consensus disorder prediction 378 397 - -
Lan13g1051 397 PIRSF UCP037471 2 395 IPR017214 -
Lan13g1051 397 ProSiteProfiles Cytochrome b561 domain profile. 170 370 IPR006593 -
Lan13g1051 397 ProSiteProfiles DOMON domain profile. 50 163 IPR005018 -
Lan13g1051 397 CDD Cyt_b561_FRRS1_like 207 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1051 Lan-Chr13 15636375 15638829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1051 - - aip:107624307 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g1051 13 15636375 15638829 Lan12g0046 12 402625 414951 PCT
Lan13g1051 13 15636375 15638829 Lan1g2041 1 35527368 35528280 PCT
Lan12g0046 12 402625 414951 Lan13g1051 13 15636375 15638829 PCT
Lan1g2041 1 35527368 35528280 Lan13g1051 13 15636375 15638829 PCT