Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0046 ATGGCTTCTCTTTCACCTTTTCTCATTGTATTCTCCATTACCCTTTTCTTCTTCTCACCAGTTTCATCCATAACTTGTTCCACCCAAAAGCTTCCATCAACCCACTCTTACACCAACTGCACCAACCTCCCTACCCTTAACGCCACCCTCCACTCCACCTACAACGCCACCAACCACTCCCTCTCCGTCGCCTTCGCCGCCGACTCACCAAAATCCGATGGCTGGGTCTCTTGGGGTATCAACCCAACAGCACCAAAAATGTTTGGAGCTGGTGCACTTATAGCAACTAAGATTAGTGGCAAAACAAACGTAAACACCTACAACCTTATCAGTGCTTCAGTTCCATATAAACAAGAGAAACTCTCGTTTGATGTTTGGGACCTTTCTGTTGAGGATGTTAATGGTGTAATCACCATTTTTGCATCGGTTAAGGTTCCAGAGAAAGGTGATAGCTTAAACCAGTTATGGCAGGTTGGGCCAATAACTAATGGGACAATTGGTGCACATGCTCTTGAGAAAGTGAATCTTGGTTCTACCGCGCCGCTGGAGGTGGCGGCGGCCGCCGTAGCACCTAGCGGAAGTGAGAGTGGGAGCAAGAATGGTGGGGTGAAGATTGGTAAGGGATTATGGTTAGGGTTTGTTTTGGTTTTGATGAGTTTCATTAATATGTGA 672 0.4673 MASLSPFLIVFSITLFFFSPVSSITCSTQKLPSTHSYTNCTNLPTLNATLHSTYNATNHSLSVAFAADSPKSDGWVSWGINPTAPKMFGAGALIATKISGKTNVNTYNLISASVPYKQEKLSFDVWDLSVEDVNGVITIFASVKVPEKGDSLNQLWQVGPITNGTIGAHALEKVNLGSTAPLEVAAAAVAPSGSESGSKNGGVKIGKGLWLGFVLVLMSFINM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0046 223 Pfam Protein of unknown function (DUF568) 87 183 IPR045265 -
Lan12g0046 223 PANTHER AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 7 209 - -
Lan12g0046 223 CDD DOMON_CIL1_like 37 185 IPR045265 -
Lan12g0046 223 ProSiteProfiles DOMON domain profile. 46 159 IPR005018 -
Lan12g0046 223 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 7 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0046 Lan-Chr12 402625 414951 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0046 - - lang:109363511 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0046 12 402625 414951 Lan1g2041 1 35527368 35528280 LSH
Lan13g1051 13 15636375 15638829 Lan12g0046 12 402625 414951 PCT
Lan12g0046 12 402625 414951 Lan13g1051 13 15636375 15638829 PCT