Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0363 ATGCAGACCCCAAAGACAAGTGGCTCCTCTGAGGTACCACAGAAGGTTTCTCCCCGCGCCATTCGCCGACTCAGGACTACTACTCTAGAGATGGGATCTGTATCTTCTTTACGTCAAGCTAATAAAATATCAAAGGAAAGAAGCCCCAACGCTGCTGGCCGCAAATCACCTAGAAGCCCAGTTTCTGAGAAGAAGCGCCCCAGCAGAATATCTGAATTGGAATCTCAAATTTCTCAACTTCAAGAGGATTTGAAGAAGGTGAGGGATCAGCTCATTTTATCTGAATCATGCAAGAAACAAGCTCAGCAAGATGCTGAGGAGTCCAAGAAGCAACTGTTAGCTTTATCTGCAAAACTCGAAGATTCGCAAAAGCAACTCCTTGAGCTATCTGCTACTGAAGAAGATCATGTTATTGTGCTCCAGAAATTGTCAGAAGAACACGATGAGGCATGGCAATCCGAGCTTGAGGTTTCGCAAAAGCCGCTCTCAGCCCACTCTTCGGTGCTGGCTTCTGCGATGGATGAGACTCAACAGCTCAAGGTCCAACTTGAATTGGTAGCTAACTTTGAGAGTGCACAAATCCAACATGTCGAATCAGCAAATGTGGGACTACTACACCTGAAGCAAAACTTGTCAGAAACTCTATCTCTTGTGGGGAGCATGAAAAACCAACCCAGAAATTACAAAGCATCTGAATCTCAGGCCCAAGATTTGATATATGAATCTTTGTTGCAACTTGAGGCTGCGAAAAAAGCTGTGGAGTTCCTACATGCTGACGCTGCAAAAGCGGTAGATACCTACAACTCCATTGCTTTAGAGTTAGACCAGTCTAGAGCACAAGTGAACTCACTAGAAGCAACTATAAGAAAACTTGAGGCAGACCTCATAAGTAATGAAGGCATTCAGTCTCGAAATCTCGCCGCTGATCATAAATTTAGGAAGGAACCTGAATGTTTGGAAGAGGATGAGGATCGTAATCAGGTTGGAGCGGAAATTTATTCTTTGAAGTCTGAGGTTGAAAGATTGAGATCTGTTATAGAGACAGCTGAGACTAAACACCAAGAAGAACAGATTCGGAACACAGTGCAAATCAGCAATGCCTATGAGTTGATGGAGAAAATAAAATCTGAATCAAGTCAGAGGGAATGTGAGATAGAGGGTGAGTTGAACAGAAAGAAAGCTCATATTGAAGAGTTGAAGGCTAACCTAATGGATAAAGAAACTGAGCTGCAAGGTATTATGGAGCAAAATGAGAACTTGAATTTAATGATTGATGAGAGCATGTCATCCCGAAAAGAACACAAACTTGATAAGGAACTTAAAAGACTCGATGAATGTATGGCTTACTTGAAGGCTGATATGATGGACAAGGAGACAACATTGCAAAGCATATCAGAAGAGAATGAGATGCTGAAGTTGGAAATGAAAAAGACGTTCTCCGATGGTGAGAAAGTGAGGGAGGAAGTTGGTACAGAATTAGAGGCAGCTAAGGCTGCAGAATGCGACGCTCTTGCGAAGCTCGGGATTGTGATGGAAGAAGCAGATAAGAGCAACCAGAAGGTGGCGAGGGTGACCGAGCAGCTAGAAGCAGCACAAGTAACAAATTCGGAAATGGAAGCAGAATTGAGAAGGCTGAAGGTACAATCTGATCAATGGAGGAAGGCTGCAGAGGTGGCGGCTGCTATGCTTTCGGCAGGAAACAATGGGAAGCTAACAGACAGAACCATGTCATTGGATGGCTATAAGTGCTCGACGTATGCAAGAGACATGGATGATGATAACTTCAACAGAAAGAAAAATAGCAACATGCTAAAGAAAATTGGTGTCTTGTGGAAGAAACCTCAAAAATAA 1851 0.4327 MQTPKTSGSSEVPQKVSPRAIRRLRTTTLEMGSVSSLRQANKISKERSPNAAGRKSPRSPVSEKKRPSRISELESQISQLQEDLKKVRDQLILSESCKKQAQQDAEESKKQLLALSAKLEDSQKQLLELSATEEDHVIVLQKLSEEHDEAWQSELEVSQKPLSAHSSVLASAMDETQQLKVQLELVANFESAQIQHVESANVGLLHLKQNLSETLSLVGSMKNQPRNYKASESQAQDLIYESLLQLEAAKKAVEFLHADAAKAVDTYNSIALELDQSRAQVNSLEATIRKLEADLISNEGIQSRNLAADHKFRKEPECLEEDEDRNQVGAEIYSLKSEVERLRSVIETAETKHQEEQIRNTVQISNAYELMEKIKSESSQRECEIEGELNRKKAHIEELKANLMDKETELQGIMEQNENLNLMIDESMSSRKEHKLDKELKRLDECMAYLKADMMDKETTLQSISEENEMLKLEMKKTFSDGEKVREEVGTELEAAKAAECDALAKLGIVMEEADKSNQKVARVTEQLEAAQVTNSEMEAELRRLKVQSDQWRKAAEVAAAMLSAGNNGKLTDRTMSLDGYKCSTYARDMDDDNFNRKKNSNMLKKIGVLWKKPQK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0363 616 Coils Coil 98 132 - -
Lan13g0363 616 Coils Coil 332 359 - -
Lan13g0363 616 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 616 - -
Lan13g0363 616 Coils Coil 389 423 - -
Lan13g0363 616 Coils Coil 267 294 - -
Lan13g0363 616 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 616 IPR029688 -
Lan13g0363 616 Coils Coil 514 555 - -
Lan13g0363 616 Coils Coil 70 90 - -
Lan13g0363 616 MobiDBLite consensus disorder prediction 28 46 - -
Lan13g0363 616 Coils Coil 454 474 - -
Lan13g0363 616 MobiDBLite consensus disorder prediction 48 71 - -
Lan13g0363 616 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0363 Lan-Chr13 2431665 2436701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0363 - - gmx:100798862 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0275 7 1762801 1767603 Lan13g0363 13 2431665 2436701 LSH
Lan8g1687 8 23758317 23763205 Lan13g0363 13 2431665 2436701 LSH
Lan10g0121 10 745733 750099 Lan13g0363 13 2431665 2436701 PCT
Lan13g0363 13 2431665 2436701 Lan10g0121 10 745733 750099 PCT