Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0121 ATGCAGAACCCAAAGGCAAGAACAGGCTCACTTGAAATTCCTAAGAAGTTTCTCAGAACTGCTGCATTTGGCACTGCCCCTGTAACTCCTTTAAATCAAGCTAACAAAACATCAAAGGATAGAACCCCTAAAATCACTGAGTGCAGATCATATAGAAGCCAAGTTCCAGAGAGAAAGCGTCCTAGCAGAATATCTGAATTGGAATCACAGATTTCTCAACTTAAAGTGGATTTGAAGAATCTGAGGGACCAGCTCTGTTTGTCTGAGTCATGCAAGAAGCAACATCAACAAGATGCTGAGGACTATAAGGAACAACTATTAGCCTTATCTGTGAAACTTGAAGATTCTCAACACCAACTTCTAAAGCTCACTGTTACTGAAGAAGCTTGTGTTACTGAGACAAAGAAAATTGCAGAAGAGAATGATGGGTCATGGCAATGGCAAACAGTCAACTCTGCCATCAATGAAATTCAGCAGCTTAAGGTTCATCTTGAATTTGTAGCAAATTTTGAGAAAGCACAAGCTCAACTTGCAGAATCATTGGACTTGGAACTTTTGGAGTTGAGGCAAAACTTGTCAGAACATCTTTCTCTTTTGGAGAACATGAAAAACCAACTCATGGATAGTTCTGAATCATCTCAATCCAACAATTCAGTCAATGATACTTTGAAGCAACTTGAGGCTTCAAAAAGAACTTTAGAGATCCTAAGAGATGATGCTGCAAAATCTGTACATGGCTACAATTCTACTGCTTTGAAGTTAGACCAATCTAGAGCAAGGGTGAACTCACTAGAAGCAATGGTAAGAAAACTTTTTGCTAGCATAACAAGTAATAAATGTCGGCATTGTGCGAATCTTGCAGCAGATGATTTTAACTTTGAAAAGGAATGTGAAAGAATGGAAAAAGGAGAGGACCCTAATGAGATTGAAGCAGAAATTCATTCTTTGAAGTCTGCCATAGAGGTTGCTAAGACTAAGCACCAGGAACAACAGATTCTGAGCACAGTGAATATCAGCAATGCATATGAGTTTATTGACTTGATAAAATCAGAATCAAGTCAGAGAGATTCTGAGCTAGAAGATAACTTGAAGAGCAAGAAAGGTGATATTGAAGAGTTGAAGGCAAACCTAATGGATAAGGAAACTGAGTTGCAACATATTATGGAGGAGAATAAGAAGCTGAATTTGAAGCTTGAAAAGAACATGTTATTGTCATCACAAAGAGAATATGAACTCAGAATGGAACTTAAAAGATTATATGAATGTGTAGCTGAACTAAAGGGAGATCTTATGGACAAAGAGAAAACATTGCAAAACATATCAGAAGATAATGAAATGCTGAAGTTGGAAATCAATAACAAGTTAAGGGAAGAAGTTGCTGCAGAAAATGAGGCTAGAATAAAACTTGGGATTATGGTGGAAGAGGCTAATAGGAACAACCAAAAGGCAATGATGGGTATTGAGAAGTTGGAAGTAGCAGAAGCTGCAAAATCAGAATTAGAAGCAGAATTGAGAAGAGTGAAGATACAATGTGATCAATGGAGAAAAGCTGCAGAAGCAGCTGCTGCTATAGTTTCAGATGGAAATAATGGAAAAATCACAGAGAGATCTTTGTCTTTGGATAACAACTATAATCTTCCTCTAATTGATAAGTACTCAACTTATAATGAAGAAGTTGAGGATGATATTCAGAGAAGGAAAAATGGCAACATGTTGAAGAAATTTGCTGTGTTGTGGAAGAAACCACAAAAATAG 1755 0.3721 MQNPKARTGSLEIPKKFLRTAAFGTAPVTPLNQANKTSKDRTPKITECRSYRSQVPERKRPSRISELESQISQLKVDLKNLRDQLCLSESCKKQHQQDAEDYKEQLLALSVKLEDSQHQLLKLTVTEEACVTETKKIAEENDGSWQWQTVNSAINEIQQLKVHLEFVANFEKAQAQLAESLDLELLELRQNLSEHLSLLENMKNQLMDSSESSQSNNSVNDTLKQLEASKRTLEILRDDAAKSVHGYNSTALKLDQSRARVNSLEAMVRKLFASITSNKCRHCANLAADDFNFEKECERMEKGEDPNEIEAEIHSLKSAIEVAKTKHQEQQILSTVNISNAYEFIDLIKSESSQRDSELEDNLKSKKGDIEELKANLMDKETELQHIMEENKKLNLKLEKNMLLSSQREYELRMELKRLYECVAELKGDLMDKEKTLQNISEDNEMLKLEINNKLREEVAAENEARIKLGIMVEEANRNNQKAMMGIEKLEVAEAAKSELEAELRRVKIQCDQWRKAAEAAAAIVSDGNNGKITERSLSLDNNYNLPLIDKYSTYNEEVEDDIQRRKNGNMLKKFAVLWKKPQK* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0121 584 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 584 IPR029688 -
Lan10g0121 584 Coils Coil 423 464 - -
Lan10g0121 584 Coils Coil 92 119 - -
Lan10g0121 584 Coils Coil 473 517 - -
Lan10g0121 584 Coils Coil 64 84 - -
Lan10g0121 584 Coils Coil 185 209 - -
Lan10g0121 584 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 584 - -
Lan10g0121 584 Coils Coil 216 243 - -
Lan10g0121 584 Coils Coil 356 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0121 Lan-Chr10 745733 750099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0121 - - gmx:100798050 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0121 10 745733 750099 Lan7g0275 7 1762801 1767603 PCT
Lan10g0121 10 745733 750099 Lan8g1687 8 23758317 23763205 PCT
Lan10g0121 10 745733 750099 Lan13g0363 13 2431665 2436701 PCT
Lan7g0275 7 1762801 1767603 Lan10g0121 10 745733 750099 PCT
Lan8g1687 8 23758317 23763205 Lan10g0121 10 745733 750099 PCT
Lan13g0363 13 2431665 2436701 Lan10g0121 10 745733 750099 PCT