Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0337 ATGGCAGCCAATTCTTCTAATGGAGATCATGTAGCATCAAAACAGCCTCCTTTGCCATCTCCTTTACGTTTTTCCAAATTCTTTCAGTCCAACATGAGAATCCTGGTTACTGGAGGAGCTGGATTCATTGGTTCTCACCTAGTCGATAGATTGATGGAAAACGAAAAAAATGAGGTCATTGTTGCTGACAACTACTTCACCGGGTCAAAGGACAACCTAAAAAAATGGATCGGTCATCCAAGATTTGAGCTTATACGTCATGATGTCACTGAGCCTTTGTTGGTTGAGGTCGATCAGATCTATCATCTTGCATGCCCCGCTTCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCGAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGAGATCCTCTTATCCATCCCCAACCTGAAAGCTATTGGGGAAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGATGAAGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGGCTAGAAATTCGCATTGCAAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGCCGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGTGGTGAATCCTTGACAGTCCAATCTCCCGGAACACAAACTCGTAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGGAGGTTCAGACACTGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCTGAAGTGGAGATAAAGATAGTGGAGAACACTCCTGATGATCCAAGACAGAGAAAACCTGACATAACAAAAGCAAAGGAATTGCTTGGGTGGGAACCACAGATCAAGTTGTGTGATGGTCTTCCTCTTATGCAAGAGGATTTTCGTTTGAGGCTTGGGATTGACAACAAGAATTAG 1038 0.4316 MAANSSNGDHVASKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPEVEIKIVENTPDDPRQRKPDITKAKELLGWEPQIKLCDGLPLMQEDFRLRLGIDNKN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0337 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 345 - -
Lan13g0337 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 336 IPR036291 -
Lan13g0337 345 CDD UGD_SDR_e 32 336 - -
Lan13g0337 345 Gene3D - 31 339 - -
Lan13g0337 345 Pfam GDP-mannose 4,6 dehydratase 35 328 IPR016040 -
Lan13g0337 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0337 Lan-Chr13 2218637 2222766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0337 29 328 Miscellaneous Gene Families AT1G02000 24.776 6.96e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0337 K08678 - qsu:112026144 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0337 13 2218637 2222766 Lan6g1970 6 30622183 30626856 PCT