Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0180 ATGTTACTTCTCAGATTCTTTGTCATTTTCATCATTGTTTCATTGTCCAATGTTATTGCCCAGGATATTCTTCAACAAAATAATAATAATAATATTGTTAAAAGGATTCATAAAATAAATAAGACAGTGACTTATGATGGAAGGTCACTCATTATCAATGGAAAACGTGAGCTTCTCTTCTCTGGTTCCATCCATTACACAAGAAGCACTCCAGAGATGTGGCCAGATCTTCTTCAAAAGGCAAAACAGGGAGGTTTGAATGTGATCCAAACCTATGTGTTTTGGAATGCTCACGAGCCTGTAAAAGGCAAGTTCAACTTTGAAGGCCAATATGATTTAGTAAAATTCATTAAGCTTGTTCAACAGAATGGAATGTATGTAACCCTTAGGGTTGGCCCTTTCATCCAAGCTGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGGTTCCAAATATTATATTTCGCTCTAACAATGAACCCTTTAAGAAACACATGAAAAAATACGTATCAGCCATAATAGGAAGAGTGAAAGAGGCAAACCTCTTTGCTCCACAAGGAGGCCCTATAATTTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGATGAGGAAGGACCTAATTATGTCCAATGGGCCGCGAAATTGGCGGTTTCAACCGATACTGGAGTTCCATGGATTATGTGCAAGCAGACAGATGCTCCTGACCCAGTAATCAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCGTCGGCCCGAACAAACCATACAAGCCTTCCATATGGACTGAAAACTGGACAGTTCAATACAGAGTATTTGGAGATCCACCATCACAAAGATCCGTGGAAGACATCGCCTTCTCAATTGCTCGCTTCTTCTCTAAGAATGGAGCTTTGGCTAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCGGCCTTTTCCACAACCCGCTATTATGATGAAGCTCCTCTTGATGAGTTTGGTCTTCAGAGAGAACCAAAATGGAGCCACTTGAGGGATGTGCACAAGGCTCTCAGCCTATGCAAGAAGGCTTTACTCACAGGTCAATCTACTACCACAAAAGTGAGCCAATTTAATGAGATTATTGTGTATGAGAAACGCGAAAGTGATTTATGTGCTGCTTTCATCACTAACAACCATACCAATATGTCAACAACTTCAAAATTTAGAGGTGTGGACTATTATTTGCCACCACGTTCCATTAGCATCCTCCCGGATTGCAAGACTATGGTCTTCAACACTCAAAATATTGTTTCACAACATAATAAAAGAAACTACAAGAAGTCAAAGGCCGCAAACGATAACCTTAAGTGGGTGATGTTTTCTGAAACCATTGCAACTACCAAACAATTGCCAGCCAAAGATAAAACGCCTGCCGAACTTTATTCCTTGCTTAAAGACACCACTGACTACGCGTGGTACACCACAAGTGTTGAGTTGGGTCCAGAAGACTTGCCAAAGAAGAATGAGCCAGCCTCCGTTCTTCGTATTATGAGTCTTGGCCATTCAATGCTGGTCTTTGTAAATGAAGAATACATAGGATCTGATCATGGTAGCCATGAGGAGAAAACCTTTGAATTTGTGAAAACTGTAAATTTCAAGGTTGGAGTTAACCAGATATCTATCTTGGCTGCAACAGTGGGACTTCCAGACAGTGGAGCATACATGGAACACAGGTATGCTGGACCAAAATCTATAACCATCCTTGGTCAAAACTCTGGAATAATTGATCTGACTCGTAATGCTTGGGGTTATGAGGTTGGTCTCCAAGGAGAGAAGAATAAAATTTTCACTGAGGAGGGATCAAAGAAAGTACAATGGAAGAATGTCAAGGGAAAAGGACATGCTCTTTCATGGTACAAGACAACATTCAAAACACCAGAAGGAAGGGACCCTGTTGCCATCAAGATGCATAGTATGGGAAAGGGAATGATTTGGATCAATGGTCTAAGCATTGGTCGACATTGGATGAGTTACCTCTCTCCTCTTGGAGAGCCTACTCAATCCGATTACCACATACCAAGAGCTTTCCTCAAAGAAAAAGACAACTTGCTTGTTATATTGGAGGAGGAGGAAAAAAACCCAGAAAACATTGTTATCCAAAGAGTGAATAGAGACACAATATGCAGCATCATTAAAGAGACTGACCCACCAAATGTGAAGTCATGGGCAAATAAGGGCATGAAACTCACACCTGTTGTGGATAAACTGATACCAGAAGCTATCCTCAAGTGTCCAAACTACAAAACCATTGTGGCTGTGGAGTTTGCAAGCTATGGTGATCCTTTAGGTGTATGTGGAGCCTTTACTTTGGGCAAATGTAATGCACCTTACACCAAGCAGATAGTTGAACAGCTTTGCTTGGGAAAAGAAGCATGTACAGTTCCATTGGAGAAATCAATGTTGTTAAAAAATGGTGAAGATGGTTGCCCAGGAGTGGTGAAGGAACTAGCTATCCAAGTGTTATGTGGCACTGGCGCCACCAAACAATGA 2547 0.4107 MLLLRFFVIFIIVSLSNVIAQDILQQNNNNNIVKRIHKINKTVTYDGRSLIINGKRELLFSGSIHYTRSTPEMWPDLLQKAKQGGLNVIQTYVFWNAHEPVKGKFNFEGQYDLVKFIKLVQQNGMYVTLRVGPFIQAEWNHGGLPYWLREVPNIIFRSNNEPFKKHMKKYVSAIIGRVKEANLFAPQGGPIILAQIENEYNHIQLAYDEEGPNYVQWAAKLAVSTDTGVPWIMCKQTDAPDPVINACNGRHCGDTFVGPNKPYKPSIWTENWTVQYRVFGDPPSQRSVEDIAFSIARFFSKNGALANYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLQREPKWSHLRDVHKALSLCKKALLTGQSTTTKVSQFNEIIVYEKRESDLCAAFITNNHTNMSTTSKFRGVDYYLPPRSISILPDCKTMVFNTQNIVSQHNKRNYKKSKAANDNLKWVMFSETIATTKQLPAKDKTPAELYSLLKDTTDYAWYTTSVELGPEDLPKKNEPASVLRIMSLGHSMLVFVNEEYIGSDHGSHEEKTFEFVKTVNFKVGVNQISILAATVGLPDSGAYMEHRYAGPKSITILGQNSGIIDLTRNAWGYEVGLQGEKNKIFTEEGSKKVQWKNVKGKGHALSWYKTTFKTPEGRDPVAIKMHSMGKGMIWINGLSIGRHWMSYLSPLGEPTQSDYHIPRAFLKEKDNLLVILEEEEKNPENIVIQRVNRDTICSIIKETDPPNVKSWANKGMKLTPVVDKLIPEAILKCPNYKTIVAVEFASYGDPLGVCGAFTLGKCNAPYTKQIVEQLCLGKEACTVPLEKSMLLKNGEDGCPGVVKELAIQVLCGTGATKQ* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0180 848 SUPERFAMILY (Trans)glycosidases 40 360 IPR017853 -
Lan13g0180 848 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 188 200 IPR019801 GO:0004553|GO:0005975
Lan13g0180 848 Gene3D - 425 580 - -
Lan13g0180 848 PANTHER BETA-GALACTOSIDASE RELATED 34 838 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 Gene3D Glycosidases 38 359 - -
Lan13g0180 848 Pfam Beta-sandwich domain in beta galactosidase 363 435 IPR041392 -
Lan13g0180 848 Gene3D - 757 847 IPR043159 -
Lan13g0180 848 SUPERFAMILY Galactose-binding domain-like 598 744 IPR008979 -
Lan13g0180 848 Pfam Glycosyl hydrolases family 35 49 355 IPR031330 -
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 53 70 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 74 92 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 129 148 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 267 282 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 304 319 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 323 339 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 633 647 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 PRINTS Glycosyl hydrolase family 35 signature 660 676 IPR001944 GO:0004553|GO:0005975
Lan13g0180 848 SUPERFAMILY Galactose-binding domain-like 419 581 IPR008979 -
Lan13g0180 848 ProSiteProfiles SUEL-type lectin domain profile. 757 842 IPR000922 GO:0030246
Lan13g0180 848 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 34 838 - -
Lan13g0180 848 Gene3D - 604 732 - -
Lan13g0180 848 Pfam Galactose binding lectin domain 761 841 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0180 Lan-Chr13 1109736 1130777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0180 40 844 Glycoside Hydrolase AT4G35010 59.480 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0180 - - gmx:100780092 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0180 13 1109736 1130777 Lan13g0180 13 1109736 1130777 ECH
Lan8g1828 8 24704968 24711188 Lan13g0180 13 1109736 1130777 LSH