Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0125 ATGGCTGCTGGACTAAAGAGAGATCCAATTGTGATACTTCGCATTGATGGGGAAGATCTAGTTGAGTTTACTAATAGTCCAAGTTATGAAGCTGAAATAGCATCTATATTCTCTCACATTGCATCACCTGAAAACTCATTTCGTCACCATGTTATTGAGGCTCTAGGGAAGCTCACTGTTGAACAAGGGATCCCTCCTATTTCTGATTCTTGGGTTATTAACAACATTGTGGAACCAGCACTACTCTCTCAGGGTGGATCTGGTTGGGATAAGTCCATTCCTGATCAAGAGAAATTTTTGGAGGAATTTAAGAAAGTGGCACTGAGTATTGCTCATCGTCTTAAGGAGCAACCAGTCATTGTTGCCCACAGTGAAAACATCTTTGATGGGAGTGGTGTTAACAGATTATTATCCAACAAGTTTGAATTAGAGAAGACTTTGAATTCAGCTTTAGAGAATTTGCCTAAAGATCGAAATGGAAAATTATCAATGGAGTATCTACGAGTGGCGTTGGACACGCTGTCTCCATGTGCTGGTTTACCTCCACTTGGTGCAATTGAAGAGATGGATAAGGTTATTGGTGAAGTCTTTAAGGTGATAAATGTAGATGATGGGAAGGTGGTGAAAGAAGATGAATTCAAGATAATTTTAACTGACATATTGGGGAGTATCATGTTGCAATTAGAGGGCAATCCCATATCAGTTTATTCGGATTCAGTAGTGCATGAGCCTCTTGACTCATCTTCTACCGAAACATCATAG 762 0.399 MAAGLKRDPIVILRIDGEDLVEFTNSPSYEAEIASIFSHIASPENSFRHHVIEALGKLTVEQGIPPISDSWVINNIVEPALLSQGGSGWDKSIPDQEKFLEEFKKVALSIAHRLKEQPVIVAHSENIFDGSGVNRLLSNKFELEKTLNSALENLPKDRNGKLSMEYLRVALDTLSPCAGLPPLGAIEEMDKVIGEVFKVINVDDGKVVKEDEFKIILTDILGSIMLQLEGNPISVYSDSVVHEPLDSSSTETS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0125 253 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 250 - -
Lan13g0125 253 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 250 - -
Lan13g0125 253 Coils Coil 133 153 - -
Lan13g0125 253 SUPERFAMILY EF-hand 121 231 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0125 Lan-Chr13 738578 740293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0125 1 249 EF-hand Containing Proteins AT4G38810 59.524 8.51e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0125 - - lang:109353171 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0066 7 338572 341102 Lan13g0125 13 738578 740293 LSH
Lan8g1873 8 24986252 25005076 Lan13g0125 13 738578 740293 LSH