Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1276 ATGTCTCACAATTCCACCAAAACCACTGTTTCGAGACTCTCTCGCTACCCGGAACCTAAGTCACCCTTGCAAAGGGAGGTTCACGCGCCCTGTACTTCACGTAAGTTCCCTTTGTCCACCAATTCAACAACACAATACTCTAATAGTTTTCACAAGGTAGTTGATATTGGAGATGATAAGAACAATAGTTTATACATCAATCATCAAAAGGCTAGAGATGATGCATTAGCTTCCATTAGTTTATTAAAGGGAAAGGAGGTCGTAGAAGTCGATAGGGGTAGTCATAAGGTCGTGGTTGTAGAAGATGGTGAGCATGAAGGGCCCTCTGTGGTAACATGCCAGAAATCGAGAGAGAGTGATGTTGTGGCTGTGTCTCAGATACATGATGATTCGGATGATAAGGTTATAGATGGCGACAATCAGCAGCATTTGACTCCACCTGTGGTTTCCGAGTTGAATAATAGTAATTTGAAGATGTTGGACAGTTTATGTCTTAGTCCGGAGTGTGGTTATTCGAGTGTTCAGGCCTACAAGAAGTTGATTGAGGCTGTTGATAATCCAACTCGAAGAGACACATTTGAAAGGCTGAGCTATGAAATTCAAATTAATGAGAAGCGCCTGGAAGTACTTGATTTATTGCGTCCAAAGGAATTAGTAGAGGAAGTACCCCAAGAACTTTTTGTTCCTCTTACTAAGGAGGAAAAAGCTGAGGTTGCACGTGCCTTTTCTGTCAAAAGGAAGGAGGTCTTGGTTACCCATGAGAAATCTAACATTGAGATCTCGGTCGACAAGTTTCGGTGCCTTATGCCTGGTGCATGGTTAAATGACGAGGTGATCAATTTGTACCTTGAGTTGCTAAAAGAGAGGGAGAGAAGAGAGTCACAGAAGTTTCTGAAATGTCACTTTTTCAATACCTTTTTCTACAAAAAGTTAATAAGTGGCACAAATGGTTATGATTTCAAATCTGTGAGAAGATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAATATTTATACCCATCCATAAACAGGTCCATTGGTGCTTGGCTGTGATCAATAACAAAGATAAGAAATTCCAGTATCTTGACTCGCTGAAAGGAGTGGATACCCAAGTGATGAAAGTGCTGGCTAAATATTTCGTAGATGAAGTAAAGGACAAGACTGGAAAAGATATTGATGTAAGTTCTTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAACAAAAGAATGGATATGATTGTGGGGTGTTTATGATCAAATATACTGACCTTTATAGCAGAAACCTTGGGCTGTGTTTCAGTCAGAAAGACATGCCCTACTTTCGGCTTAGAACAGCAAAGGAAATCTTGAGATTGAAAGCTGTCTGA 1383 0.4042 MSHNSTKTTVSRLSRYPEPKSPLQREVHAPCTSRKFPLSTNSTTQYSNSFHKVVDIGDDKNNSLYINHQKARDDALASISLLKGKEVVEVDRGSHKVVVVEDGEHEGPSVVTCQKSRESDVVAVSQIHDDSDDKVIDGDNQQHLTPPVVSELNNSNLKMLDSLCLSPECGYSSVQAYKKLIEAVDNPTRRDTFERLSYEIQINEKRLEVLDLLRPKELVEEVPQELFVPLTKEEKAEVARAFSVKRKEVLVTHEKSNIEISVDKFRCLMPGAWLNDEVINLYLELLKERERRESQKFLKCHFFNTFFYKKLISGTNGYDFKSVRRWTSQKKLGYGLHECDKIFIPIHKQVHWCLAVINNKDKKFQYLDSLKGVDTQVMKVLAKYFVDEVKDKTGKDIDVSSWEKEFVEDLPEQKNGYDCGVFMIKYTDLYSRNLGLCFSQKDMPYFRLRTAKEILRLKAV* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1276 460 Gene3D Adenoviral Proteinase; Chain A 216 458 - -
Lan12g1276 460 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 3 126 - -
Lan12g1276 460 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 152 459 - -
Lan12g1276 460 MobiDBLite consensus disorder prediction 1 36 - -
Lan12g1276 460 MobiDBLite consensus disorder prediction 1 15 - -
Lan12g1276 460 Pfam Ulp1 protease family, C-terminal catalytic domain 273 454 IPR003653 GO:0006508|GO:0008234
Lan12g1276 460 ProSiteProfiles Ubiquitin-like protease family profile. 258 430 IPR003653 GO:0006508|GO:0008234
Lan12g1276 460 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 3 126 - -
Lan12g1276 460 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 152 459 - -
Lan12g1276 460 SUPERFAMILY Cysteine proteinases 227 458 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1276 Lan-Chr12 18590216 18595780 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1276 K08592 - gmx:100797013 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1276 12 18590216 18595780 Lan12g1276 12 18590216 18595780 ECH
Lan12g1276 12 18590216 18595780 Lan16g1170 16 19036360 19044371 PCT
Lan16g1170 16 19036360 19044371 Lan12g1276 12 18590216 18595780 PCT