Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0135 ATGAGGAAAAAGCTAACTTTTTTGTGGTGTATTTGGATTTTGCTATGTGGGTCTTGCATGGGAAGGTTTGTAGTGGAGAAAAATAATTTAAAAATCACTTCTCCAAAATCATTGAGAGGTATATATAACTGTGCAATTGGGAATTTTGGAGTGCCAAAATATGGAGGAACCATGATTGGTTCTGTGGTGTACCCAAGAGTGAATCAGAATGGATGTAAGAATTTTGATGGTTCCTTTACTTCCAAGCCTGGAAGCTTCCCTACCTTTGTTCTTGTTGATCGAGGAGATTGCTTCTTCACTTTAAAGGCATGGAATGCACAGAATGGTGGAGCAGCAGCTATTCTTGTAGCAGATGACAGGGCAGAACCATTGATTACAATGGACTCTCCTGAAGAAGGGAACGGTTCAAATAACGATGATTACGTTGAAAAGATTAGCATCCCTTCTGCTCTTATCAGCATGGCACTTGGTGATAGCATCAAGACGGCTCTCTCAAATGGAGATATGGTTAATGTAAATCTTGACTGGAGAGAGGCACTTCCACACCCTGATGATAGAGTTGAATATGAATTATGGAGTAATAGTAATGACGAGTGTGGACCAAAGTGTGAGAATTTAATTAACTTTGTCAAGAGTTTTAAAGGTGCAGCTCAGTTACTAGAGCAGAAAGGGTTCACTCAGTTTACACCTCACTATATAACTTGGTATTGTCCAGAAGCATTTATCTTGAGCAAACAGTGCAAGTCTCAGTGCATAAACAACGGGAGGTACTGTGCACCAGATCCTGAGCAAGATTTCAGTAGAGGGTATGATGGAAAAGATGTTGTTATTCAAAATTTGAGGCAAGCTTGCTTTTTTAAAGTTGCAAATGAAAGCGGAAAACCTTGGCAATGGTGGGACTATGTGACCGATTTCTCAATCAGGTGCCCAATGAGAGAGAACAAGTTCACTGAAGATTGCTCAGATCAAGTCATTAAATCTCTTGGTCTTGATTTGAAGAAGGTTACAGATTGTGTTGGGGATACTCATGCTAATGTTGATAATCCTATTCTTAAGGGTGAACAGGATGCACAGATTGGCAAAGGCGATCGCGGTGATATTACTATACTACCAACTATTGTTATAAACAACAGACAGTATAGAGGTAAGTTGTCAAAAGCAGCAGTCCTCAAGGCACTCTGTGCATCATTCCAAGAAACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGCAAAACAATGGTGGGTGTTGGCAGGACAAATCTGCTAACATTACTGCATGCAGGGACACTTTCAGAGGAAGAGTTTGTGAGTGTCCTATTGTACAAAATGTGAAGTTTGCTGGTGATGGATATACTCACTGTGAAGCAACGGGAGCCTTGAGATGTGCAGTCAACAATGGAGGCTGTTGGAAGGGAGCCCAAGGTGGGAGGGCTTACTCGGCTTGTATCGATGATCACACAAAAGGTTGTAAATGTCCACCAGGATTTAGGGGTGATGGAGTCCACTCATGTGAAGACATTGATGAATGCAAAGAGAAATCGGCATGCCAGTGCCCAGAGTGCAATTGCAAAAACACATGGGGGAGTTATGAATGCAAATGCAATGGTGGTTTGTACTATGCAAGAGAAAATGACATGTGTATTGGTAAATATAGTGCTTCAGCCGGCAGTGGCGGTAGTAGCTTCGTTTGGATGTTTGTTCTGATCTTGGCTGTTGCTGGTGCTGCTGGTTTTGCATTTTACAAGTACAGAATCCAGAGATATATGGATTCTGAGATAAGGGCAATAATGGCCCAATACATGCCATTGGATAATCAACCAGAGAATTCCAATCATAATCAACCTCATCATGGTGTCTAG 1881 0.4141 MRKKLTFLWCIWILLCGSCMGRFVVEKNNLKITSPKSLRGIYNCAIGNFGVPKYGGTMIGSVVYPRVNQNGCKNFDGSFTSKPGSFPTFVLVDRGDCFFTLKAWNAQNGGAAAILVADDRAEPLITMDSPEEGNGSNNDDYVEKISIPSALISMALGDSIKTALSNGDMVNVNLDWREALPHPDDRVEYELWSNSNDECGPKCENLINFVKSFKGAAQLLEQKGFTQFTPHYITWYCPEAFILSKQCKSQCINNGRYCAPDPEQDFSRGYDGKDVVIQNLRQACFFKVANESGKPWQWWDYVTDFSIRCPMRENKFTEDCSDQVIKSLGLDLKKVTDCVGDTHANVDNPILKGEQDAQIGKGDRGDITILPTIVINNRQYRGKLSKAAVLKALCASFQETTEPSICLTPDMETNECLQNNGGCWQDKSANITACRDTFRGRVCECPIVQNVKFAGDGYTHCEATGALRCAVNNGGCWKGAQGGRAYSACIDDHTKGCKCPPGFRGDGVHSCEDIDECKEKSACQCPECNCKNTWGSYECKCNGGLYYARENDMCIGKYSASAGSGGSSFVWMFVLILAVAGAAGFAFYKYRIQRYMDSEIRAIMAQYMPLDNQPENSNHNQPHHGV* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0135 626 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Lan12g0135 626 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 11 604 - -
Lan12g0135 626 SMART egfca_6 513 555 IPR001881 GO:0005509
Lan12g0135 626 Pfam PA domain 60 160 IPR003137 -
Lan12g0135 626 Gene3D Laminin 464 555 - -
Lan12g0135 626 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 604 - -
Lan12g0135 626 Gene3D - 20 183 - -
Lan12g0135 626 CDD EGF_CA 513 544 - -
Lan12g0135 626 SUPERFAMILY PA domain 89 170 IPR046450 -
Lan12g0135 626 Gene3D Laminin 407 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0135 Lan-Chr12 1569656 1573929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0135 4 624 Miscellaneous Gene Families AT3G52850 69.071 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0135 - - gmx:100815266 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0135 12 1569656 1573929 Lan12g0135 12 1569656 1573929 ECH
Lan11g1644 11 31979541 31986614 Lan12g0135 12 1569656 1573929 PCT
Lan12g0135 12 1569656 1573929 Lan11g1644 11 31979541 31986614 PCT