Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1644 ATGAGTATAAAGTTAAGTTTTTTGTTAAGTATTAGTATTTTGCTCTTGTGGGGTGATTGTTGTTTTGGAAGGTTTATGGTGGAGAAGAACAATTTGAAAGTGACTTCTCCAAAATCATTGAAGGGTGTGTATGAATGTGCAACTGGAAATTTTGGGATTCCTAAGTATGGAGGAACATTGATTGGTTCTGTAGTGTACCCAAAGGTGAATCAGAAAGGTTGCAAGAGCTTCAGTGATGTTGATACTTCTTTTCAGTCCAAACCTGGAGGGTTCCCTACTTTTGTTCTTGTTGATCGTGGAGATTGCTACTTCACATTGAAGGCATGGAACGCACAAAACGGTGGAGCAGCAGCTATTCTTGTAGCTGATGACAAGGCAGAACAATTGATCACGATGGACACTCCTGAGGGTGGGAGTGCTGTAAATGATGAGTACGTCGAAAAGATAACTATTCCTTCTGCTCTTATCAGCAAATCCTTGGGAGATAGCATCAAGAAGGCTCTGTCTGATGGGGAGATGGTTAACGTAAATCTTGATTGGAGAGAGGCCCTTCCGCATCCAGATGATAGAGTTGAGTACGAGTTATGGACGAACAGCAATGACGAGTGTGGGCCAAAGTGTGACACTCAAATTAATTTTCTCAAGAGTTTTAAAGGGTCAGCTCAGTTACTTGAGAAACAAGGGTTCACTAAGTTTACCCCTCACTATATAACTTGGTTTTGCCCCGAAGCATTTCTCTTAACCAAACAGTGCAAGTCTCAGTGCATAAACAATGGGAGGTACTGTGCTCCAGATCCTGAGCAAGATTTCAATAAAGGGTATGACGGAAAAGATGTTGTTATTCAAAACTTACGGCAAGCTTGCTTCTTTAAAGTGGCCAGCGAAAGTGGAAAGCCTTGGCAATGGTGGGACTATGTGACTGATTTTTCTATCCGTTGTCCGATGAAAGATAATAAGTACACAGAAGAATGCTCAGATGATGTTATTAAATCTCTTGGTTTTGATCTGAAGAAGATCAAAGATTGTGTCGGCGATCCTCATGCAGATGTTGAAAACCCAGTTCTTAAGGCTGAACAGGATGCACAGATTGGCAAAGACTCTCGTGGTGATGTTACTATTCTGCCTACTGTTGTTATAAACGACAGACAGTATAGAGGTAAGTTGACAAGAGCAGCAGTTCTCAAGGCAATCTGTTCAGGTTTCCAAGAGGCCACTGAACCACCAATGTGCTTAACTACAGATATGGAAACAAACGAATGTTTAGAAAACAACGGTGGTTGTTGGCAGGACAAATCCACTAACATTACTGCATGCCAGGACACTTTCCGCGGAAGAGTATGTGAGTGCCCTCTAGTACAAAATGTGAAGTTTGTTGGTGATGGATATACTCACTGTGAAGCTTCAGGAGCCTTGAGGTGTGAAATCAACAACGGAGGTTGTTGGAAGGGAGCTGAAGGTGGCAAAGCCTACTCTGCTTGTATTGATGCCCATACAAAAGGATGTACTTGTCCACCAGGGTTCAGAGGTGATGGAGTCAACTCCTGTGAAGATATCGACGAGTGCAAAGAGAAATCGGCATGCCAGTGCCCAGAGTGCAGATGCAGAAACACCTGGGGGAGTTATGAGTGCCTATGTAGCAGTGGTTTGTTCTACATGCAAGAAAATGACATGTGTATTGGTAAATATAGTGCTTCAGTGTCAAGTGGAAGTTTCATTTGGATGCTTATCCTCATGTTGGGTGTTGCTGGTGCTGGTGGATATGCATTTTACAAGTACAGGATCCAGAGTTATATGGACTCGGAGATAAGGGCAATTATGGCCCAATACATGCCTTTGGATAATCAACCAGAAAACTCTAATCATCAAGTTCATCATGATATCTAG 1884 0.4246 MSIKLSFLLSISILLLWGDCCFGRFMVEKNNLKVTSPKSLKGVYECATGNFGIPKYGGTLIGSVVYPKVNQKGCKSFSDVDTSFQSKPGGFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVADDKAEQLITMDTPEGGSAVNDEYVEKITIPSALISKSLGDSIKKALSDGEMVNVNLDWREALPHPDDRVEYELWTNSNDECGPKCDTQINFLKSFKGSAQLLEKQGFTKFTPHYITWFCPEAFLLTKQCKSQCINNGRYCAPDPEQDFNKGYDGKDVVIQNLRQACFFKVASESGKPWQWWDYVTDFSIRCPMKDNKYTEECSDDVIKSLGFDLKKIKDCVGDPHADVENPVLKAEQDAQIGKDSRGDVTILPTVVINDRQYRGKLTRAAVLKAICSGFQEATEPPMCLTTDMETNECLENNGGCWQDKSTNITACQDTFRGRVCECPLVQNVKFVGDGYTHCEASGALRCEINNGGCWKGAEGGKAYSACIDAHTKGCTCPPGFRGDGVNSCEDIDECKEKSACQCPECRCRNTWGSYECLCSSGLFYMQENDMCIGKYSASVSSGSFIWMLILMLGVAGAGGYAFYKYRIQSYMDSEIRAIMAQYMPLDNQPENSNHQVHHDI* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1644 627 Gene3D Laminin 410 456 - -
Lan11g1644 627 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 606 - -
Lan11g1644 627 Pfam Complement Clr-like EGF-like 501 520 IPR026823 -
Lan11g1644 627 SMART egfca_6 517 559 IPR001881 GO:0005509
Lan11g1644 627 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 11 606 - -
Lan11g1644 627 Gene3D Laminin 472 559 - -
Lan11g1644 627 CDD PA_VSR 50 178 - -
Lan11g1644 627 Gene3D - 22 187 - -
Lan11g1644 627 SUPERFAMILY PA domain 94 171 IPR046450 -
Lan11g1644 627 CDD EGF_CA 517 548 - -
Lan11g1644 627 Pfam PA domain 62 164 IPR003137 -
Lan11g1644 627 ProSitePatterns Calcium-binding EGF-like domain signature. 517 543 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1644 Lan-Chr11 31979541 31986614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1644 8 627 Miscellaneous Gene Families AT3G52850 72.830 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1644 - - gmx:100807514 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1644 11 31979541 31986614 Lan12g0135 12 1569656 1573929 PCT
Lan12g0135 12 1569656 1573929 Lan11g1644 11 31979541 31986614 PCT