Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0314 ATGGCTCTGTTTTCCTCTGTTTCACTCTGCATGGCTCTCTTCTTTTTCTTCTTATTCAATTCCTGCTATGTCTCTTTCTCTGCTACAATCAACCATAAGAATAACTCATTCTCACTCTCTTTCCCTCTCTCAACAACAACACTTTCAAATTCCAAAACCAACCCAAAACTCAAAACCTTGTTATCATCAACATCATTATCTTCTTTCAACCTGAAATCCAGTTTCAAGTATTCAATGGCTCTTATCGTTTCTCTTCCCATTGGGACTCCTCCACAAATTCAACAAATGGTTTTGGACACAGGAAGCCAACTCTCTTGGATTCAGTGCCATAACAAAGCTCCTAAAAAAACACCTCCTACGACGTCGTTTGACCCTTCTCTCTCTTCTTCTTTCTCCATCATCCCATGCACTCACCCACTCTGCAAACCCCGCGTTCCCGATTTTACCCTTCCCACCACCTGCGACCAGAACCGCCTCTGCCACTACTCTTACTTCTACGCTGACGGAACCTACGCTGAGGGCAATCTCGTCAGAGAAAAACTAACCTTCTCCCCTTCCCAAACTACCCCTCCCCTCACCCTCGGTTGCGCTACAGAGTCCAGCGACTCAAGGGGCATTTTGGGAATGAATCTTGGTCGCTTGTCTTTCCCTTCCCAAGCTAAAATCACTAAATTCTCATACTGTGTCCCGGTTCGACAACCCCGACCCGGTTCAGCTACCGGTTCATTCTACCTTGGAAATAACCCGGTTTCAAATCGGTTCCGTTATGTAAACATGTTGACCTTCACTCAAAGTCAACGCATGCCTAACCTAGACCCATTAGCGTACACTGTTCCAATGCAAGGTATAAGAATCGGTGGAAAGAAGCTGAACATCCCACCCTATGTTTTCAAACCCAACGCTGGTGGGTCGGGTCAAACCATGGTTGATTCCGGATCCGAATTCACTTTCCTAGTTGATGAGGCTTATGATAGAGTGCGGGAGGAGGTAGTAAGATTGGTGGGACCCAAATTGAAGAAGGATTACGTGTACGGTGATGTTGCTGATATGTGTTTTGATGGTGATGTGATTGAAATCGGACGGTTGTTAGGGGACATGGTATTTGAATTCGAGAAAGGCGTGGAGATAGTGATTCCTAAGGAAAGGATGATTGCTGACGTGGAAGGTGGGGTCCACTGTTTGGGGATTGGGAGGTCTGAAAGATTGGGTGCGGCAGGTAACATTATAGGGAACTTCCACCAGCAGAATCTGTGGGTGGAGTTTGATTTGGCCAATCATAGAGTGGGTTTCGGTGAAGCTGAGTGTAGCAGATTAGGTTAG 1320 0.4614 MALFSSVSLCMALFFFFLFNSCYVSFSATINHKNNSFSLSFPLSTTTLSNSKTNPKLKTLLSSTSLSSFNLKSSFKYSMALIVSLPIGTPPQIQQMVLDTGSQLSWIQCHNKAPKKTPPTTSFDPSLSSSFSIIPCTHPLCKPRVPDFTLPTTCDQNRLCHYSYFYADGTYAEGNLVREKLTFSPSQTTPPLTLGCATESSDSRGILGMNLGRLSFPSQAKITKFSYCVPVRQPRPGSATGSFYLGNNPVSNRFRYVNMLTFTQSQRMPNLDPLAYTVPMQGIRIGGKKLNIPPYVFKPNAGGSGQTMVDSGSEFTFLVDEAYDRVREEVVRLVGPKLKKDYVYGDVADMCFDGDVIEIGRLLGDMVFEFEKGVEIVIPKERMIADVEGGVHCLGIGRSERLGAAGNIIGNFHQQNLWVEFDLANHRVGFGEAECSRLG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0314 439 Pfam Xylanase inhibitor C-terminal 275 431 IPR032799 -
Lan11g0314 439 PANTHER ASPARTYL PROTEASE-RELATED 11 438 IPR001461 GO:0004190|GO:0006508
Lan11g0314 439 ProSiteProfiles Peptidase family A1 domain profile. 81 431 IPR033121 -
Lan11g0314 439 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 11 438 - -
Lan11g0314 439 Gene3D Acid Proteases 58 245 IPR021109 -
Lan11g0314 439 Gene3D Acid Proteases 246 438 IPR021109 -
Lan11g0314 439 Pfam Xylanase inhibitor N-terminal 82 247 IPR032861 -
Lan11g0314 439 SUPERFAMILY Acid proteases 82 437 IPR021109 -
Lan11g0314 439 CDD pepsin_A_like_plant 82 435 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0314 Lan-Chr11 2041428 2043270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0314 83 438 Miscellaneous Gene Families AT1G77480 25.581 1.50e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0314 - - gmx:100790706 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0213 4 3529708 3531443 Lan11g0314 11 2041428 2043270 PCT
Lan11g0314 11 2041428 2043270 Lan4g0213 4 3529708 3531443 PCT