Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0762 ATGAACTTCGATCCTGCATCCGCCAAATCTTCACAAATTCTCAACACTATAAAGGAAATTTCATCTTCCTCGCGAACCATTCCTTCCGACAAGGATTTCAAATTATGCTACACCTCCGACGAATTCAAACGCCCTATCGACGAAATCGCCAGAAAATCGAACTCAATGTTGCAAAAAATCGGCGCCGCCAAGCATATTTGGGGCACGGAGGAAGCTGATTTTCCCGTCGGAATCGACGACGCATATGAATGGCTCGTTGATGTGAATCAAGAGGTTTTTGGACGGGTTGATGAGTCGATTAAGGAGTTGCAGAAGATTATGAAGTTTGAGGATGATGAAATGGAATTGGAAAATGGGAAGAAGAAAAAAATGAAGAAAGTGAGAGTGGAAACAAAGGATAAGGAGAAAGTTTCGTTTCATATATCTGCGATTGAGAAGCCTCAGAACAGGTATAACTTTTTGGTTAATAATGCAAACCAACCTTTTCAGCATGTTTGGTTGGAGAGAAGTGATGATGGTCAGAGGTTTATTCATCCACTGGAGAAACTCTCTGTTTTAGATTTTGTTGATAAAGATGTTGAGGATCTTGTGCCAATAGAACCTCCCTCATTAGAAAGCACCCCTTTCAAGCTTGTGGAAGAAGTCAAAGGATTGAAGGAGTTGGCTGCTAAGCTTCATTCTGTTAATGAATTTGCGGTGGATTTGGAACATAATCATTATCGGTCTTTCCAAGGTTTGACTTGCTTGATGCAAATCTCAACTAGGACTGAAGATTTTATTGTAGATACCCTGAAGCTTCGTGTTCATGTTGGACCTTACCTGAGGGAACTCTTCAAGGATCCTACCAAGAAGAAAGTCATGCATGGAGCAGATTCAGATATTGTGTGGTTGCAACGAGATTTTGGCATTTACGTTTGTAATTTGTTTGACACTGGCCAGGCTTCAAGGGTGTTAAAATTGGAGAGATTTAGCTTGCAATATCTTTTGCTTCACTATTGTGGGGTTATTGCAAACAAAGAATACCAGAAAGCAGATTGGAGACTACGGCCTCTACCCGATGTCATGCTGAGATATGGCAGAGAAGATACACACTATCTGCTGTACATATATGATTTAATGAGGATCAAGTTACTTGCACTGTCTAAGGAGTCTGAAAGTTCTGATAATCTTCTGGTGGAGGTTTACAAGCGCAGTTATGATGTCTGTATGAAGCTATATGAGAAAGAACTTCTGACAGAAGACTCATACCTTCATATATATGGGTTACAAGGGGCTAGTTTTAATGGACAGCAGCTTGCCATTGTTTCCGGGCTTTATGAATGGCGGGACATTGTTGCTCGTGCAGAGGATGAGGGTACTGGCTATGTATTGCCAAATAAAACTATACTTGAAATCGCTAAGCAGATGCCTGTCACTACAAGCCATCTACGTCGATTGGTAAATTTATATCTCCCATATATTGAGCGCAACCTTGACGTTATTCTCAGTATCGTTAGACATTCTGTACAAAATGCTCCTGCCTTTGAAGAAGCTGCACTACGTTTGAAAGAAGCCCACACAGCAAGTGTATCAAATGCACTATCCAGTAAGGATAAAGCTCCTGGTACGCTAGCAAAAGGAAGTACTGGAATTGAAAATGTCACCTCTGTTAATATCTCAGAGAAGGCTCCATTTTCTTCAGACCTGAAGGAGGAATCTTTTCAGCACCAGGATAAAAATGGACAAATAACAACTAAATCCAATTGTCCCACTTCAGAGCTCCCAAAGGATAAAGGAGCAAATGTTCAATTGCTTAAAACGCCTACTGGTGATGGCGGGGTACTTCTGGGAAATTCAGCTTCCAAAACTGAGCTTGATTATGTTAAAAAGGCCAAGGAAGAGGTCAAGTTGGAGCAGATCGGATCGTCTATCAACCTTCCTTTACATTCAGGCACCATTTCGACTTCAACTCCAGCTGATGTTATAATGATAGACTCTGACACGGATTCGGAGGATATGGCACAGAACAATGTAGGAAGGGACAATGAGCAACGGGAGAACGAGGATGAAGATGACTCGTCCTCTTTCTCAGACTTGTCATTGTAG 2085 0.4149 MNFDPASAKSSQILNTIKEISSSSRTIPSDKDFKLCYTSDEFKRPIDEIARKSNSMLQKIGAAKHIWGTEEADFPVGIDDAYEWLVDVNQEVFGRVDESIKELQKIMKFEDDEMELENGKKKKMKKVRVETKDKEKVSFHISAIEKPQNRYNFLVNNANQPFQHVWLERSDDGQRFIHPLEKLSVLDFVDKDVEDLVPIEPPSLESTPFKLVEEVKGLKELAAKLHSVNEFAVDLEHNHYRSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLRELFKDPTKKKVMHGADSDIVWLQRDFGIYVCNLFDTGQASRVLKLERFSLQYLLLHYCGVIANKEYQKADWRLRPLPDVMLRYGREDTHYLLYIYDLMRIKLLALSKESESSDNLLVEVYKRSYDVCMKLYEKELLTEDSYLHIYGLQGASFNGQQLAIVSGLYEWRDIVARAEDEGTGYVLPNKTILEIAKQMPVTTSHLRRLVNLYLPYIERNLDVILSIVRHSVQNAPAFEEAALRLKEAHTASVSNALSSKDKAPGTLAKGSTGIENVTSVNISEKAPFSSDLKEESFQHQDKNGQITTKSNCPTSELPKDKGANVQLLKTPTGDGGVLLGNSASKTELDYVKKAKEEVKLEQIGSSINLPLHSGTISTSTPADVIMIDSDTDSEDMAQNNVGRDNEQRENEDEDDSSSFSDLSL* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0762 694 MobiDBLite consensus disorder prediction 571 587 - -
Lan10g0762 694 Gene3D HRDC domain 414 509 IPR044876 -
Lan10g0762 694 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 17 643 IPR045092 GO:0000175|GO:0000467
Lan10g0762 694 SUPERFAMILY HRDC-like 410 504 IPR010997 GO:0000166|GO:0044237
Lan10g0762 694 SMART hrdc7 428 507 IPR002121 GO:0003676
Lan10g0762 694 MobiDBLite consensus disorder prediction 644 694 - -
Lan10g0762 694 Pfam 3'-5' exonuclease 212 375 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lan10g0762 694 PANTHER 3'-5' EXONUCLEASE 17 643 - -
Lan10g0762 694 CDD Rrp6p_like_exo 205 397 - -
Lan10g0762 694 ProSiteProfiles HRDC domain profile. 428 508 IPR002121 GO:0003676
Lan10g0762 694 MobiDBLite consensus disorder prediction 644 666 - -
Lan10g0762 694 Gene3D - 143 413 IPR036397 GO:0003676
Lan10g0762 694 SMART 35exoneu6 209 378 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lan10g0762 694 Pfam HRDC domain 431 497 IPR002121 GO:0003676
Lan10g0762 694 SUPERFAMILY Ribonuclease H-like 144 408 IPR012337 -
Lan10g0762 694 MobiDBLite consensus disorder prediction 562 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0762 Lan-Chr10 10212469 10224942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0762 K12591 - gmx:100804872 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0762 10 10212469 10224942 Lan5g0214 5 2641183 2657420 LSH