Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1417 ATGGCAAAGGAAGAAGTGCTTGAGTTCCTGGGATCAGTTCCTCTGTTGCAGAGGCTTCCTAGCTCCTCCGTGATGAAGATATCTGAACTAGTGGTTCTCAAACATTATGAGCCAGGAGAGTATGTTGTTCGTGAAGGTGAACCTGGTGATGGTCTTTACTTCATATTGAAAGGAGAGGCTGAGGTTGTTGGCACTTTTAGTGATAATGATAAAGATCATCCAGAGTTTCAATTGAAAAGATATGATTATTTTGGTTTTGGTAATAAACTTATCCTATTCTGTAATGGTTCAAAACGGCATGCTTTTTGTTTAAGTGTCTTCCATTCATCCCATATGCTTAAGAATAATGTGAATTCGAAACTTGCAGTTTTAGCAAATGCAGTTCACCATGCAGATGTTGTAGCTGTGACTAAGCTGTCATGTTTAGTGCTGCCTCATGAGCACTCAACACTGCTGCAGCCAAAGTCTATATGGAGTGCAGAAGAATCTCTTGAAACAAGCTCACCCATGGAAAATATATTGCATTTGGAGCCGATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCATATGCTCCAAAATTTGGGAAAGTGTTTGGGGGACAATTAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTATCTTAAAGCTGTTCATAGCTTGCATTCCTATTTTCTTCTTGTGGGGGATTATAACATGCCAATTATATATCGAGTTGATCGTCTCCGAGATGGGAAGAGCTTTGCTACAAGGAAAGTGGATGCTATCCAAAATGGAAATGTCATATTCACTTTGTTGGCTTCATTTCAACTTTTGTCAATGGAAGATTTACGACAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACTTATCGGAACAAGGTTGCAACTTCTGAGTTCATCCCTTGGCCCATAGAGATACGGTTCTGTGAACCTAAACCTTCAACAAATCAGACCAAATCTCCTCCCAGTCTGAAATACTGGTTTAGAGCAAAGGAAAAACTATCAGATGATCAGGCATTACATAGGTGTGTGGTTGCATACACATCAGATCTAGTATTTCTTCAAGTAAGTATCAATCCTCACCGTCAGAAGGGCTTAAAGGCGCACGGTGTGAGTCTGGATCACTCGATGTGGTTTCACCGACCTATAAAAGCTGATGACTGGGTGTTATTTGTGATATTTAGTCCTAATTCCTATAATGCACGCGGCATTGTCTCAGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGATGCAAGAAGGTCTAACTAGGAAGGATAATTCTGCAATCAAATCCAAGTTGTAA 1326 0.4095 MAKEEVLEFLGSVPLLQRLPSSSVMKISELVVLKHYEPGEYVVREGEPGDGLYFILKGEAEVVGTFSDNDKDHPEFQLKRYDYFGFGNKLILFCNGSKRHAFCLSVFHSSHMLKNNVNSKLAVLANAVHHADVVAVTKLSCLVLPHEHSTLLQPKSIWSAEESLETSSPMENILHLEPIEVDIFRGITPPYAPKFGKVFGGQLVGQALAAASKSVDYLKAVHSLHSYFLLVGDYNMPIIYRVDRLRDGKSFATRKVDAIQNGNVIFTLLASFQLLSMEDLRQQRLTDPRLPRTYRNKVATSEFIPWPIEIRFCEPKPSTNQTKSPPSLKYWFRAKEKLSDDQALHRCVVAYTSDLVFLQVSINPHRQKGLKAHGVSLDHSMWFHRPIKADDWVLFVIFSPNSYNARGIVSGQMFNQKGELLVSLMQEGLTRKDNSAIKSKL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1417 441 CDD Thioesterase_II_repeat2 182 273 - -
Lal9g1417 441 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Lal9g1417 441 Pfam Cyclic nucleotide-binding domain 34 86 IPR000595 -
Lal9g1417 441 Gene3D Hotdog Thioesterase 284 434 - -
Lal9g1417 441 SMART cnmp_10 15 168 IPR000595 -
Lal9g1417 441 PANTHER ACYL-COA THIOESTERASE 124 439 - -
Lal9g1417 441 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Lal9g1417 441 Gene3D Hotdog Thioesterase 162 275 - -
Lal9g1417 441 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 167 274 IPR029069 -
Lal9g1417 441 Gene3D Jelly Rolls 2 158 IPR014710 -
Lal9g1417 441 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 295 431 IPR029069 -
Lal9g1417 441 Pfam Thioesterase-like superfamily 188 429 - -
Lal9g1417 441 PANTHER ACYL-COA THIOESTERASE 124 439 IPR003703 GO:0006637|GO:0047617
Lal9g1417 441 CDD CAP_ED 15 148 IPR000595 -
Lal9g1417 441 SUPERFAMILY cAMP-binding domain-like 4 148 IPR018490 -
Lal9g1417 441 CDD Thioesterase_II_repeat1 328 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1417 Lal-Chr9 15970335 15980736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1417 1 432 Acyl Lipid Metabolism Gene Families AT1G01710 57.395 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1417 K01068 - gmx:100781122 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1417 9 15970335 15980736 Lal9g1417 9 15970335 15980736 ECH
Lal9g1417 9 15970335 15980736 Lal22g0834 22 6249753 6259881 PCT
Lal22g0834 22 6249753 6259881 Lal9g1417 9 15970335 15980736 PCT