Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0834 ATGGAAAAGGAGAAAGTGATTGAGTTTCTCGGATGCGTTCCTCTTCTGCAGAGGCTTCCTAGCGCATCTCTCAGGAAGGTATCTGAGCTTGTGGTTTTCAAACACTATGAGCAAGGAGAGTATGTTGTTCGAGAGGGTGAGCCTGGGGATGGCATGTACTTCATATGGGAAGGACAGGCTGAAGTTGTTGGATCTTTAAGCGTCAATGATGAAAATCGTCGAGAGTTCCAATTGAAAAGATGTGACTACTTTGGTTGTGGTAGTAAACTTAACTGTTATTCTTCAAAACATACTTTATTGTTTAAGAAGTATTTTCCTTTCCTTTTCTTAAGCCAGCTGACATGCTTAGTGCTGCCCCATGAGCACTTGGCAATGCTGCAGTCAGAGTCTATCTGGACGTGTTCACCACCTGTAGAGGATATATTGCATTTGGAACCTATGCCACACTTAGATGATATCTTCCAAGGAATCACCCTTCCAGGTTCTCCACATTTTGGGAAGGTATTCGGGGGACAGTTGATTGGACAGGCACTTGTTGCAGCATCAAAATCTGCTGACCACCTTAAGGTTGTTCACAGTTTTCATGCCTACTTTATTCTTGCTGGGGATTTGAACATACCGATTATATATAAAGTTCACCGTCTTCGTGATGGAAAGAGTTTTGCCACACGGAATGTGGATGCAATTCAAAAGGGAAAACTCATATTCACTTTGATGGCTTCATTTCAACTTCTGCCAATGGAAGAGCTACGAGAGAGACGTCTTACTGATGCCCGTTTTCCAATAGCTTACCGGAACAAAGTGGCTACAACTGAATTCATCCCTTGGCCCATAGAGATCCGGTTCTGTGAAGCTAAAATTTCAACAAATATGACAAAATCTCCTCCCAGTTTCAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTACATAGGTGTGTGGTGGCATATGCTTCAGATCTAATTTTTCTTCAAGTGAGTTTGAATCCCCACCGTAGTAAGGGTTTCAGGACACGGTCCGTTAGTCTGGATCACTCGATGTGGTTTCATCGACCTATAAGAGCTGATGACTGGGTGCTATTTTGGATCTTCACTCCTACTTCAAATAATGCTCGTGGCTATGTCACAGGCCATATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGTCTAGCCAGGATCAGGACGGTTAATTCAGAAAATTCAGCTATTAAGCCTAAGTTATGA 1251 0.4277 MEKEKVIEFLGCVPLLQRLPSASLRKVSELVVFKHYEQGEYVVREGEPGDGMYFIWEGQAEVVGSLSVNDENRREFQLKRCDYFGCGSKLNCYSSKHTLLFKKYFPFLFLSQLTCLVLPHEHLAMLQSESIWTCSPPVEDILHLEPMPHLDDIFQGITLPGSPHFGKVFGGQLIGQALVAASKSADHLKVVHSFHAYFILAGDLNIPIIYKVHRLRDGKSFATRNVDAIQKGKLIFTLMASFQLLPMEELRERRLTDARFPIAYRNKVATTEFIPWPIEIRFCEAKISTNMTKSPPSFRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRSKGFRTRSVSLDHSMWFHRPIRADDWVLFWIFTPTSNNARGYVTGHMFNQKGELLVSLVQEGLARIRTVNSENSAIKPKL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0834 416 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 270 401 IPR029069 -
Lal22g0834 416 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 142 244 IPR029069 -
Lal22g0834 416 Gene3D Hotdog Thioesterase 256 402 - -
Lal22g0834 416 Gene3D Hotdog Thioesterase 133 245 - -
Lal22g0834 416 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Lal22g0834 416 Gene3D Jelly Rolls 1 132 IPR014710 -
Lal22g0834 416 PANTHER ACYL-COA THIOESTERASE 52 416 - -
Lal22g0834 416 CDD CAP_ED 15 85 IPR000595 -
Lal22g0834 416 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Lal22g0834 416 SMART cnmp_10 15 135 IPR000595 -
Lal22g0834 416 CDD Thioesterase_II_repeat1 299 399 - -
Lal22g0834 416 Pfam Cyclic nucleotide-binding domain 34 85 IPR000595 -
Lal22g0834 416 PANTHER ACYL-COA THIOESTERASE 52 416 IPR003703 GO:0006637|GO:0047617
Lal22g0834 416 SUPERFAMILY cAMP-binding domain-like 5 98 IPR018490 -
Lal22g0834 416 CDD Thioesterase_II_repeat2 152 243 - -
Lal22g0834 416 Pfam Thioesterase-like superfamily 166 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0834 Lal-Chr22 6249753 6259881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0834 1 401 Acyl Lipid Metabolism Gene Families AT1G01710 57.110 5.54e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0834 K01068 - gmx:100803260 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1417 9 15970335 15980736 Lal22g0834 22 6249753 6259881 PCT
Lal22g0834 22 6249753 6259881 Lal9g1417 9 15970335 15980736 PCT