Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1361 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAGTCAACTCATCGTCCCCGCCCTCGAAAAAATCATCAAGAACGCTTCGTGGCGAAAACACGCCAAGCTCACTCACGAATGTAAATCGGTAATCGAAACCCTCACTTTTAGGAATCCACAATCCCACGAGGCCGCCGATGATGCGGGCGAGCCCGAGGCATTTGTTCCGGGCCCGCTCCATGTCGGCGGCCGCGTGGAATATTCATTTTCTGAGTCAGAATCCATACTCAGCCCTCTTATTAATGCAGCCGGCTCCGGCTTCGTTAAGATCGCGGAGCCGGCTGTTGATGCTGTACAGAAGCTGATCGCCCATGGCTATCTCCGTGGCCAGGTGGACATGGCCGGAGATGGCAACGAGGCGAAGCTTCTGTCGAATTTGATTGAATCTGTTTGTAAGTGCTATGAGTTAGGGGATGATGCTTTAGAATTGTTGGTGTTGAAGACGTTGTTATCTGCGGTAACTTCGATTTCTTTGAGGATTCATGGAGATTGTTTGCTTTTGATTGTTAGGACTTGTTATGATATATATGTATGTAGTAAGAATTTGGTGAATCAGACGACTGCGAAGGCGTCGTTGATTCAAATGTTGGTGATTGTGTTTAGGAGAATGGAGGCAGATTCGTCTACGGTTCCGATTCAGCCTATTGTTGTGGCTGAATTGATGGATCCCGTGGAAAAATCTGATGTGGATAACTCGACGATGTTTGTACAGGGTTTTATGACAAAGATCATGCAGGATATTGATGGGGTTTTGAATCCCGGGACACCTAGTAGTAAGGGTGGTCATGATGGTGCGTTTGAGACCACTCTAGCGCAGACTACGAATCCATCGGATTTGTTGGATTCTACTGATAAGGACATGTTGGATGCTAAGTATTGGGAGATCAGTATGTACAAGACGGCGCTGGAGGGAAGGAAAGAGGAGCTGGTGGATGGGGAGGTGGTGGAGAGGGATGATGATTTGGAGATTCAGATTGGGAATAAGCTGAGGAGAGATGCATTTTTGGTGTTCAGAGCGCTTTGTAAATTGTCTATGAAGACGCTCCCTAAGGATGTGTCTGCCGATCCACAGTTGATGAAGGGGAAGATTGTGGCTTTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGAGCTGTCTTCAGAACTAATGAAAGGTTTTTGGGTGCTATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTATGATTGTTTTTCAGTTATCATGCTCCATCTTCATCAGTCTCGTATCAAGATTTAGAGCTGGACTGAAAGCAGAAATAGGAGTGTTTTTCCCCATGATTGTGCTCAGGGTTCTGGAAAATGTTGCTCAATCTAATTTTCAGCAAAAGATGATAGTGCTTCGTTTTCTAAAGAAGCTTTGTGTTGATTCACAGATATTGGTAGACATTTTTATCAACTATGACTGTGATGTCAATTCACCAAACATATTTGAGAGAATGGTCAATGGACTTCTTAAAACTGCCCAAGGTGTCCCTCCTGGTATAACGACCACAGTTTTGCCACCTCAGGAGGCAACGCTAAAACTTGAAGCCATGAAATGCTTGGTTGCTGTTTTAAAATCAATGGGAGACTGGATGAACAAGCAATTGCAAATTCCAGATATCCATTCAGTGAGGAAAGTTGAAGCAATTGATAACGGACATGATGTTGGAGGTCTTCCCATGGCAAATGGGAATAGAGAAGAGCCGGTTGAAGGATCAGACACTCATTCTGAAATCTCTAATGAGGCATCTGAGGCTTCAACTATTGAGCTGCGCCGGGCTTATAAACTGGAACTTCAGGAAGGTATATCACTATTTAATAGGAAGCCTAAGAAAGGAATTGAATTCCTCATCAATGCCAATAAAGTGGGTAATTCACCAGAGGATGTAGCTGCTTTTCTTAAAGATGCATCTGGGCTGAACAAGACTCTGATTGGTGACTACCTTGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCTTATGTGGATTCTTTTGATTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGCATTCCTTCAAGGCTTTAGACTGCCCGGTGAGGCTCAGAAAATTGATCGAATCATGGAAAAGTTTGCCGAACGTTATTCCAAATGTAATCCAAAAGTCTTTTCTACTGCTGATACAGCGTATGTACTTGCATACTCAGTGATTTTGCTCAATACGGATGCTCATAATCCTATGGTGAAGAAGAAGATGTCTGCTGATGATTTCATTAAAAACAACCGGGGCATAGATGATGGAAAAGATTTACCAGAGGAATTCTTGAGGTCCTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAGTTGATCTGGCACCTCAACAAAGACAGGCTGCGAACTCTAACCGACTTTTAGGTTTGGATAGTATATTGAATATTGTGATCCCTAAGCGTGGGGAAGACAATCATATGGAAACCAGCGATGATCTAATCCGACGTATGCAAGAACAATTCAAAGAAAAAGCTCGTAAAACTGAGTCAGTGTACTATGCAGCAACAGATGTGGTAATCCTTAGATTCATGACGGAGGTGTGTTGGGCACCGATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAATTGTAACAGCTCTATGTCTTGAAGGTTTCCGCTATGCTATTCATGTTACTTCTGCAATGTCCATGAAGACTCAGAGAGATGCTTTTGTGACCTCATTAGCAAAGTTTACCTCCTTGCATTCTCCTGTCGATATTAAGCAGAAAAACGTAGATGCAATCAAGGCAATAATTACTATTGCTGATGAGGATGGGAATTATTTGCAAGAAGCATGGGAACATATCTTGACATGTGTTTCTCGATTTGAGCATCTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCTTTTCCTCACAATGATTCTGAAAAGGCAAAGCAAGCAAAATCAACTATTCTTCCTGTGTTGAAGAAGGGACCTGGGAGGATGCATTATGCAGCATCCACGGTGATGCGGGGTTCATATGATAGTGCTGGAATCGGTAGTAATGCTGCTGGAGCCGTTACATCAGAACAGGTGAACAATCTAGTTTCTAATCTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAATCGCATATTTACTCGGAGTCAGAAGCTGAACAGTGAGGCAATAATAGATTTTGTTAAGGCCCTATGCAAGGTCTCCATTGAAGAACTGAGATCTCCATCTGATCCGCGGGTGTTCAGCCTTACAAAGATAGTTGAGATCACGCACTACAATATGAACCGCATCAGGTTTGTGTGGTCAAGTATCTGGCATGTTCTTTCAGAATTCTTTGTGAACATTGGGTGTTCTGAAAACCTTTCAATTGCAATTTTTGCAATGGATTCTTTGCGTCAATTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAAAGAGCTAATTATCAGATGTGTCTCTCAAATGGTTTTATCTCGTGTCAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACGGCGGCATATGATGACCACAGAAACATTGTACTCTTGGCTTTTGAAGTTATTGAGAAGATTATTCGAGATTACTTTCCACACATCACTGAAACTGAAACTACCACCTTTACAGATTGTGTGAATTGTCTAATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCCTAAATGCCATTGCCTTTCTTAGATTCTGTGCAATAAAACTTGCTGAAGGAGACCTTGGCTCCTCCTCAAGGACTAAGGACAAGGAAACTCCTGGAAAGAATTCCTTGTCTTCACCTCAAACAGGGAAAGACAAACAAGATAATGGAGAGGTGACAGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTATCTGAGCTTAGCTTTGACCCAAGGCCTGAGATAAGGCAGAGTGCCTTGCAAGTCCTGTTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTACCTTTATGGGAGAGAGTATTTGAATCAGTCTTATTTCCCATATTTGATTATGTTCGCCACACTATTGATCCTTCCGGGAGTAGCTCATTGGTCAATGAAGTAGAGACTGATGGTGAACTTGATCAAGATGCATGGCTTTACGAGACATGCACATTAGCCCTCCAATTGGTTGTAGATCTTTTCGTAAAATTTTATAACACCGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTTGTAAGCTTTATAAAGCGCCCCCATCAAAGCCTTGCTGGCATTGGTATTGCAGCATTTGTTCGTTTGATGAGTAACGCTGGAGAGCTATTTTCTGACGAGAAGTGGTTAGAAGTTGTTTTGTCACTAAAAGAAGCAGCAAATGCAACACTACCAAACTTTTCATTCCTTGACAGTGTAGACTCTGTGATTAGAAATCATGAACATGCTTCAACAGCTGATGATGACAGAGATACTGCTGAGTCTGGCTCGCCTGATAATAGTTCCCGTCATCTGTATGCATATTTATCTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTGTTGATTCAGGCGGTGATGGAGATCTATAACATGTTCCGATCTCAACTTTCAGCGAGAACCGTTCTAGTTTTGTTTGATGCTTTGCATGATGTAGCATTCCATTCTCACAAGATTAACAGCAACATTATCTTACGTTCAAAGCTTCTAGAGTTTGGTCCTATGACCCAACTGCAAGACCCTCCATTGTTACGCCTAGAGAATGAGTCCTACCAAATATGTCTCACATTTTTACAGAACCTTGTTGTGGACAAGCCTCGTAGTTACGAGGAGGCTGAAGTTGAGACCCATCTTGTTCGGCTTTGTTACGAAATCTTGGAGTTTTATATTGAAGTTGCAGGTTCTGGACGAGTATCCGAATCTTCTCATGGTAGACAGCAGCATTGGTTAATTCCTTTAGGCTCTGGGAAGCGAAGAGAATTGGCTGCACATGCACCTCTCGTCGTGGCTACTCTTAATGCTATTTGTAATATGGGAAATATTTCTTTCAAGAAGAACCTGGCTCATTTTTCCCCTCTTCTCTCGAGTTTGATAAGTTGCGAACACGGTTCAACCGAGGTCCAGGTAGCTCTCAGTAACATGCTTATTTTATCAGTAGGTCCTGTTGTGCTAAGAACATGTTGA 5322 0.4224 MASSEADSRLSQLIVPALEKIIKNASWRKHAKLTHECKSVIETLTFRNPQSHEAADDAGEPEAFVPGPLHVGGRVEYSFSESESILSPLINAAGSGFVKIAEPAVDAVQKLIAHGYLRGQVDMAGDGNEAKLLSNLIESVCKCYELGDDALELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYVCSKNLVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMDPVEKSDVDNSTMFVQGFMTKIMQDIDGVLNPGTPSSKGGHDGAFETTLAQTTNPSDLLDSTDKDMLDAKYWEISMYKTALEGRKEELVDGEVVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTLPKDVSADPQLMKGKIVALELLKILLENAGAVFRTNERFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQSNFQQKMIVLRFLKKLCVDSQILVDIFINYDCDVNSPNIFERMVNGLLKTAQGVPPGITTTVLPPQEATLKLEAMKCLVAVLKSMGDWMNKQLQIPDIHSVRKVEAIDNGHDVGGLPMANGNREEPVEGSDTHSEISNEASEASTIELRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEDVAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYSKCNPKVFSTADTAYVLAYSVILLNTDAHNPMVKKKMSADDFIKNNRGIDDGKDLPEEFLRSLFERISRNEIKMKEVDLAPQQRQAANSNRLLGLDSILNIVIPKRGEDNHMETSDDLIRRMQEQFKEKARKTESVYYAATDVVILRFMTEVCWAPMLAAFSVPLDQSDDEIVTALCLEGFRYAIHVTSAMSMKTQRDAFVTSLAKFTSLHSPVDIKQKNVDAIKAIITIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPHNDSEKAKQAKSTILPVLKKGPGRMHYAASTVMRGSYDSAGIGSNAAGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSIEELRSPSDPRVFSLTKIVEITHYNMNRIRFVWSSIWHVLSEFFVNIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIKELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHRNIVLLAFEVIEKIIRDYFPHITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCAIKLAEGDLGSSSRTKDKETPGKNSLSSPQTGKDKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRQSALQVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHTIDPSGSSSLVNEVETDGELDQDAWLYETCTLALQLVVDLFVKFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKEAANATLPNFSFLDSVDSVIRNHEHASTADDDRDTAESGSPDNSSRHLYAYLSDAKCRAAVQLLLIQAVMEIYNMFRSQLSARTVLVLFDALHDVAFHSHKINSNIILRSKLLEFGPMTQLQDPPLLRLENESYQICLTFLQNLVVDKPRSYEEAEVETHLVRLCYEILEFYIEVAGSGRVSESSHGRQQHWLIPLGSGKRRELAAHAPLVVATLNAICNMGNISFKKNLAHFSPLLSSLISCEHGSTEVQVALSNMLILSVGPVVLRTC 1773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1361 1773 SUPERFAMILY ARM repeat 408 1502 IPR016024 -
Lal9g1361 1773 Gene3D - 685 803 IPR023394 -
Lal9g1361 1773 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 340 498 IPR032691 -
Lal9g1361 1773 Gene3D - 591 684 - -
Lal9g1361 1773 MobiDBLite consensus disorder prediction 571 601 - -
Lal9g1361 1773 Pfam C-terminal region of Mon2 protein 1341 1402 IPR032817 -
Lal9g1361 1773 Pfam Domain of unknown function (DUF1981) 1161 1243 IPR015403 -
Lal9g1361 1773 SMART sec7_5 608 793 IPR000904 GO:0005085|GO:0032012
Lal9g1361 1773 ProSiteProfiles SEC7 domain profile. 604 791 IPR000904 GO:0005085|GO:0032012
Lal9g1361 1773 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 216 IPR032629 -
Lal9g1361 1773 Pfam BIG2 C-terminal domain 1564 1761 IPR046455 -
Lal9g1361 1773 SUPERFAMILY Sec7 domain 608 799 IPR035999 GO:0005085|GO:0032012
Lal9g1361 1773 Pfam Sec7 domain 612 793 IPR000904 GO:0005085|GO:0032012
Lal9g1361 1773 CDD Sec7 611 793 IPR000904 GO:0005085|GO:0032012
Lal9g1361 1773 MobiDBLite consensus disorder prediction 1301 1331 - -
Lal9g1361 1773 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1765 - -
Lal9g1361 1773 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1361 Lal-Chr9 15144971 15156656 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1361 K18442 - gmx:100789988 3043.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1361 9 15144971 15156656 Lal9g1361 9 15144971 15156656 ECH
Lal9g1361 9 15144971 15156656 Lal14g0891 14 11294586 11306862 PCT
Lal9g1361 9 15144971 15156656 Lal19g0233 19 2174922 2186755 PCT
Lal14g0891 14 11294586 11306862 Lal9g1361 9 15144971 15156656 PCT
Lal19g0233 19 2174922 2186755 Lal9g1361 9 15144971 15156656 PCT