Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0233 ATGGCTTCTTCGGAAGTCGATTCCCGTTTGAGACAACTCGTTGTTCCCGCGCTCGAGAAGATCGTCAAGAATGCTTCATGGCGAAAGCACGCGAAGCTCGCTCACGAGTGCAAATCTGTCATCGAGAGGCTTACGAATCGGCAGTTACCAACGCCGGGTTCGCCTTCTGATGAACCGGAAAACTCGCCGCCGGGACCGCTCTATGATGGAGGTGTGATAGAGTACTCCCTCGCTGAGTCTGAATCGATTCTCAGCCCTCTCATCAATGCCGCTGGATCCGGCGTATTGAAGATCGCTGAGCCTGCGGCTGATGCGATCCAGAAACTTATCGCCCATGGTTATCTTCGCGGTGAGGCGGACCCTACCGGTGGCGCGGCCGAGGCGAAATTGTTGTTGAATTTGATTGAATCTGTGTGCAAATGCCATGATTTTGGGGATGATGCGATGGAATTGCTTCTACTGAAGACGCTTTTATCTGCGGTAACATCCATTTCGTTGCGAATTCATGGAGATTGTTTGCTTTTGATAGTGCGAACTTGTTATGATATTTATCTGTTGAGTAAAAATGTAGTGAATCAAACGACCGCAAAGGCGTCATTGATTCAGATGCTGGTGATTGTGTTTAGGAGAATGGAAGCGGATTCGTCCACGGTTCCAATTCAGCCGATTGTGGTGGCTGAATTGATGGAACCTGTGGAGAAATCTGATGTGGATAACAGCATGACACAGTTTGTGCAAGGGTTTATCACTAGGATTATGCAGGACATTGATGTGGTTTTGAACCCGGTGACCCCTGGTAAGATTTCTTCGTTAAGTGGGCATGATGGCGCGTTTGAGACTACCACGGTGGAGACCACGAATCCAACGGATTTGTTGGATTCGACGGATAAGGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTATAAGACGGCTCTGGAGGGAAGGAAAGGAGAGCTGGTGGATGGGGAGATTGTGGAGAGGGATGATGATTTGGAAGTTCAGATTGGAAACAAGTTGAGGAGGGATGCTTTTTTGGTGTTTAGGGCACTTTGCAAATTATCCATGAAGACTCCACCTAAGGAGGCGTCTTCTGATCCGCAGTTGATGAGGGGGAAGATTGTGGCTTTGGAATTGTTGAAGATTCTGCTGGAGAATGCTGGAGCAGTGTTTAGGACTAGCGAAAGGTTTTTAGGTGCCATTAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTTTGATTGTTTTTCAACTATCATGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGGTTGAAAGCAGAAATTGGAGTTTTTTTCCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCAAATTTTCAGCAAAAGATGACTGTGCTTCGATTTCTAGAGAAGCTTTGTGTTGATTCACAGATATTGGTTGACATATTTATCAATTATGACTGTGATGTCAATTCACCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAACAACCACACTTTTGCCACCTCAAGAAACAATGCTAAAACTTGAAGCCATGAAAAGCTTGGTTTCTGTTTTAAAATCAATGGGAGACTGGATGAACAAACAGTTGCGAATTCCAGATCCTCATTCATCCAAGAAAGTTGAACCAGCTGATAACAGCAGTGAAGCTGGAAGTTTACCCATGACAAGTGGGTACGGGGAAGAGCAAGTTGAAGGATCAGACTCTCATTCTGAAATCACCAATGATGCCTCTGATGTTTCAAATATTGAGCAACGTCGGGCTTATAAACTGGAACTTCAGGAAGGTATATCACTTTTTAATAGGAAACCTAAGAAAGGAATTGAGTTCCTCATCAATGCCAACAAAGTGGGTGATTCACCAGAGGATATAGCTGCATTTCTTAAAGATGCATCTGGGTTGAACAAGACATTGATTGGTGATTATCTGGGAGAAAGGGAAGAATTATCCTTGAAGGTAATGCATGCCTACGTGGATTCCTTTAACTTTCAAGGGATGGAGTTTGACGAGGCAATCAGGGCCTTTCTTCAAGGATTTAGATTGCCTGGCGAGGCACAGAAAATTGATCGGATCATGGAAAAATTTGCTGAACGTTACTGCAAATGTAATCCAGAGGCCTTTTCTAGTGCTGACACAGCATACGTCCTTGCATATTCTGTGATAATGCTAAACACAGATGCTCACAATCCTATGGTGAAGAACAAGATGTCTGCTGATGATTTCATAAGAAACAATCGCGGCATTGATGACGGGAAAGATCTACCAGATAAGTACTTGAGGTCCCTATTTGAGAGAATATCTAGAAACGAGATCAAAATGAAAGAAAATGATATGCCTCCCCAACAAAGACAGTCTGTGAACCCTAATAGACTATTAGGTTTGGATAGTATATTGAATATCGTGATCCGAAAGCGTGGGGAAGATATGGAGACCAGTGATGACCTCATCCGCCATATGCAAGAACAATTCAAAGAAAAAGCTCGAAAAACTGAGTATGTTCACCCATATTATTCCTTCCCAAAATCAAACACAACATTAACCCAGGGCTGTTTATGGCATGAAGAATCTTATTTTGGAAGTTTTCATTTAACTTCAGTTACTTTCATAATTTCAATGTCAATCTATTATGCAGCAACAGATGTTATAATCCTTAGATTCATGATTGAGGTGTGCTGGGCACCGATGTTAGCTGCTTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTGTAATATCTCTTTGCCTTGAAGGCTTCCGCTATGCTATTCATGTCACATCTGTAATGTCCATGAAGACTCACAGAGATGTTTATGTGACTTCATTAGCGAAGTTTACCTCACTGCATTCTCCTGCTGATATTAAGCAGAAAAACATAGATGCAATTAAGGCAATAGTTACTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACTTGTGTCTCCCGGTTTGAGCATTTACATCTTCTTGGAGAGGGAGCTCCACCAGATGCCACATTCTTTGCCTTTCCTCAGAATGATTCGGAAAAAACAAAGCCAGCAAAATCAAACATTCTTCCTGTGTTGAAGAAGAAGGGACCTGGAAGGATGCAGTATGCGGCTGCCACATTGATGCGTGGTTCTTATGATAGTGCTGGAATTGGCGGTAATGTTTCTGGAGCAGTCACATCGGAACAGGTGAACAATCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAATCGCATATTCACCCGGAGTCAGAAGTTAAACAGTGAGGCCATAATCGACTTTGTTAAGGCTCTATGTAAGGTCTCAATGGAGGAATTGAGATCTCCATCCGATCCACGGGTTTTCAGCCTTACAAAGATGGTTGAGATTGCGCACTATAATATGAATCGCATCAGACTTGTGTGGTCAAGCATTTGGCACGTTCTCTCTGATTTCTTTGTAAACATTGGCTGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAGGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCGTTTGTCATTGTCATGCGAAAGAGTAGTACGATAGAAATTAGAGAACTAATCATCAGATGTGTCTCTCAAATGGTTTTATCTCGTGTCAACAATGTGAAATCTGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCATATGATGACCACAAAAATATTGTTCTCTTGGCTTTTGAAATTATTGAGAAAATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACCACTTTCACAGACTGTGTGAATTGTTTAATTGCTTTCACTAATAGTAGATTCAACAAAGAGATTAGCCTAAATGCCATTGTTTTTCTTCAGTTCTGTGCAACAAAACTAGCACAAGGAGACCTTGGCTCATCATCCAGGAATAAAGATAAGGAAGTTTCTGGAAAGATTTCCTCACCTTCACCTCGAACAGGAAAAGAGGGGAAACAAGATAATGGAGAGGTGACTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCCGGTGAGGATGTTATATCAAGTTTGTCTGAGCTTAGCTTTGATCCAAGACCTGAGATTAGGAAGAATGCCTTGGAAGTCCTATTTAAAACTTTACGCAATCATGGCCATCTCTTTTCACTTCCTTTATGGGAAAGAGTATTTGAGTCAGTCCTTTTTCCAATATTTGATTATGTTCGACATGGTATTGATCCTTCAGGGAGTAGTTCACCGGTTAATGAAGTAGTGGCTGATGGTGAGCTTGATCAAGATGCTTGGCTTTACGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTGTCAACTTTTACGACACTGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTGGTGAGCTTTATACAGCGTCCTCATCAAAACCTTGCTGGCATTGGTATTGCTGCATTTGTCCGTTTGATGAATAATGCTGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTGTCACTAAAAGAAGCAGCAAATGCAACACTACCTAATTTTTCTTTCCTTGAAAGTGAAGGCTTCATGGCTAGAGATCATGAAAATGCTTCAACAGATGAAGATGACAGAGATGTTGCCGAGTCTGGCTCACCGGATAATTTAGCAAGCCCGAGGGCTCACCATTTTTATGCATATTTATCAGATGCTAAATGCCGAGCTGCTGTTCAACTTTTATTGATTCAGGCAGTGATGGAAATCTATAACATGTATCGATCTCACCTTTCTGCAAAAACCATGCTAGTCCTGTTTGACGCATTGCATGATGTAGCATTACATGCTCATAAGATCAACAACAATACTATATTGCGTTCGAATCTACAAGAGTTTGGTTCTATGACTCAAATGCAAGACCCTCCACTGTTACGCCTTGAGAATGAGACATACCAAACATGCCTAACATTTTTACAGAACCTAGTTGTGGACAGGCCTCCTAGTTTAGATCAAATATCTGAATCTTGTCATGATCGGCAACCACATTGGCTAATCCCCTTAGGCTCGGGGAAGCGGAGAGAATTGGCTGCACGATCAACTCTTGTCGTGGCTACACTTCAAGCTATTTGTACTTTGGGAGAGATTTCTTTTGAGAAGAATCTTTCTCATTTTTTCCCTCTTCTCTCAAGCTTGTCAGAATTGATGTATTACCAAGATGCTTATTGGCTTAATGTTGTATGCTACATTTACTCGGCTTAA 5376 0.4165 MASSEVDSRLRQLVVPALEKIVKNASWRKHAKLAHECKSVIERLTNRQLPTPGSPSDEPENSPPGPLYDGGVIEYSLAESESILSPLINAAGSGVLKIAEPAADAIQKLIAHGYLRGEADPTGGAAEAKLLLNLIESVCKCHDFGDDAMELLLLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLLSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDVDNSMTQFVQGFITRIMQDIDVVLNPVTPGKISSLSGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEIVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEASSDPQLMRGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMTVLRFLEKLCVDSQILVDIFINYDCDVNSPNIFERMVNGLLKTAQGVPPGVTTTLLPPQETMLKLEAMKSLVSVLKSMGDWMNKQLRIPDPHSSKKVEPADNSSEAGSLPMTSGYGEEQVEGSDSHSEITNDASDVSNIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGDSPEDIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPEAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPDKYLRSLFERISRNEIKMKENDMPPQQRQSVNPNRLLGLDSILNIVIRKRGEDMETSDDLIRHMQEQFKEKARKTEYVHPYYSFPKSNTTLTQGCLWHEESYFGSFHLTSVTFIISMSIYYAATDVIILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDVYVTSLAKFTSLHSPADIKQKNIDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKPAKSNILPVLKKKGPGRMQYAAATLMRGSYDSAGIGGNVSGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKMVEIAHYNMNRIRLVWSSIWHVLSDFFVNIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSTIEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIVFLQFCATKLAQGDLGSSSRNKDKEVSGKISSPSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGEDVISSLSELSFDPRPEIRKNALEVLFKTLRNHGHLFSLPLWERVFESVLFPIFDYVRHGIDPSGSSSPVNEVVADGELDQDAWLYETCTLALQLVVDLFVNFYDTVNPLLRKVLMLLVSFIQRPHQNLAGIGIAAFVRLMNNAGELFSDEKWLEVVLSLKEAANATLPNFSFLESEGFMARDHENASTDEDDRDVAESGSPDNLASPRAHHFYAYLSDAKCRAAVQLLLIQAVMEIYNMYRSHLSAKTMLVLFDALHDVALHAHKINNNTILRSNLQEFGSMTQMQDPPLLRLENETYQTCLTFLQNLVVDRPPSLDQISESCHDRQPHWLIPLGSGKRRELAARSTLVVATLQAICTLGEISFEKNLSHFFPLLSSLSELMYYQDAYWLNVVCYIYSA 1791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0233 1791 Pfam BIG2 C-terminal domain 1617 1771 IPR046455 -
Lal19g0233 1791 Pfam Dimerisation and cyclophilin-binding domain of Mon2 7 214 IPR032629 -
Lal19g0233 1791 Pfam Domain of unknown function (DUF1981) 1203 1285 IPR015403 -
Lal19g0233 1791 MobiDBLite consensus disorder prediction 1575 1595 - -
Lal19g0233 1791 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 1710 1771 - -
Lal19g0233 1791 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 8 858 - -
Lal19g0233 1791 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 895 1708 - -
Lal19g0233 1791 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 342 500 IPR032691 -
Lal19g0233 1791 CDD Sec7 613 795 IPR000904 GO:0005085|GO:0032012
Lal19g0233 1791 SMART sec7_5 610 795 IPR000904 GO:0005085|GO:0032012
Lal19g0233 1791 Gene3D - 688 806 IPR023394 -
Lal19g0233 1791 MobiDBLite consensus disorder prediction 1341 1375 - -
Lal19g0233 1791 Pfam C-terminal region of Mon2 protein 1397 1451 IPR032817 -
Lal19g0233 1791 SUPERFAMILY Sec7 domain 610 801 IPR035999 GO:0005085|GO:0032012
Lal19g0233 1791 Gene3D - 605 687 - -
Lal19g0233 1791 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 8 858 - -
Lal19g0233 1791 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 895 1708 - -
Lal19g0233 1791 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 1710 1771 - -
Lal19g0233 1791 ProSiteProfiles SEC7 domain profile. 606 793 IPR000904 GO:0005085|GO:0032012
Lal19g0233 1791 MobiDBLite consensus disorder prediction 45 66 - -
Lal19g0233 1791 MobiDBLite consensus disorder prediction 553 603 - -
Lal19g0233 1791 SUPERFAMILY ARM repeat 376 1697 IPR016024 -
Lal19g0233 1791 MobiDBLite consensus disorder prediction 1575 1590 - -
Lal19g0233 1791 Pfam Sec7 domain 614 795 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0233 Lal-Chr19 2174922 2186755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0233 K18442 - gmx:100798955 3004.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0891 14 11294586 11306862 Lal19g0233 19 2174922 2186755 LSH
Lal9g1361 9 15144971 15156656 Lal19g0233 19 2174922 2186755 PCT
Lal19g0233 19 2174922 2186755 Lal9g1361 9 15144971 15156656 PCT