Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0907 ATGGGAGAGGATAACAAAGACCAGGACTTCTTTTCACACAAATTCCCAACTACCTCTCAGGTAGTGGAAGAGCTTAAGGAACTATGGAGCATGGCCTTACCCATAACAGCTATGAACATGTTGGTGTTTGTGAGAGCAGTGGTTTCAGTTCTGTTCCTAGGTTGGCTTGGAAGTTTGGAACTAGCAGGTGGTGCACTATCTATTGGTTTCACCAACATAACAGGGTACTCTGTTCTTGTTGGTCTTGCTGCAGGTCTTGAACCTGTGTGTAGCCAAGCCTATGGTAGCAAGAATTGGGACCTACTCTCTCTTTCACTTCAAAGAATGGTTCTCATTCTCCTTATGGCAATCATGCCTATAAGTCTTCTATGGATCAACCTTGAAAAAATCATGCTTTTCATGGGCCAAGACATTGACATAACAAGAATGGCATCTATTTATTGTTTTTATTCTTTGCCAGATCTTTTGACCAACACTTTGTTGCAACCTCTGAGGGTGTTTTTGAGGTCTCAAAAGGTGACAAAACCCATGATGTATTGCTCCCTTGTGGCTGTAACTTTCCATGTTCCTTTGAACTATGTTTTGGTGGTGGTGATGAGGCTTGGGGTGCCTGGGGTGGCCATGGCCTCAGTGATCACAAACCTGAACATGGTTGTGTTAATGGCAGGGTATGTGTGTTTGTGGAGGAAGAATGAGATGGTGCTTAAGTGGGGTGGTGGTGGTGGTGGTGGAATGGCGGTGGTGTGTGGTGGGTTAGGGCAGTTGATGAAGTTGGCTGTGCCTAGTTGCTTCATGATATGCTTGGAGTGGTGGTGGTATGAGATTGTGACTGTAATGGCTGGGTATTTGCCTAATCCAACTCTGGCTGTGGCTGCTACTGGGATTTTGATTCAGACCACTAGCATGATGTACACTGTTCCAATGGCACTTGCTGGTTGTGTTTCTGCAAGAGTAGGGAATGAGCTTGGAGCTGGTAAGCCATACAAGGCTAAGCTAGCAGCAATGGTTGCCCTAGGATGTGCCTTTGGGTTGGGCTTCATCAATGTGACATGGACTGCAATATTTGGACACAGATGGGCTGGGCTTTTCACCAATGATGAGGCTATCAAAGCCTTGGTTACCTCGGTCATGCCGATTATGGGCCTGTGTGAGCTTGGAAACTACCCGCAAACCACAGGCTGTGGCATCCTACGTGGCACGGCTAGGCCCGTCATTGGGGCTCACATCAACCTGGGTTCATTCTACATTGTTGGAACCCCGGTGGCAATGGGCTTAGCATTTTGGTTAAAGGTTGGGTTTAGTGGGCTTTGGTTCGGGCTTCTGTCTGCCCAGTTGGCTTGTGCTGTGTCAATCCTCTATGTTGTGTTGGCCCGTACAGATTGGGAAGCTGAGGCTTTGAAGGCTGAGAAACTCACAAGGGTTGAGATGGGTAGTTGTAATGAGCATAGAATAATAGAGAGTGAGAAAGATGAAGAATGCAAGAGGTTGTTGGTTAATGCAAATATAAACAAAGATGATATTTGCTAA 1527 0.4637 MGEDNKDQDFFSHKFPTTSQVVEELKELWSMALPITAMNMLVFVRAVVSVLFLGWLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGSKNWDLLSLSLQRMVLILLMAIMPISLLWINLEKIMLFMGQDIDITRMASIYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVTFHVPLNYVLVVVMRLGVPGVAMASVITNLNMVVLMAGYVCLWRKNEMVLKWGGGGGGGMAVVCGGLGQLMKLAVPSCFMICLEWWWYEIVTVMAGYLPNPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFGLGFINVTWTAIFGHRWAGLFTNDEAIKALVTSVMPIMGLCELGNYPQTTGCGILRGTARPVIGAHINLGSFYIVGTPVAMGLAFWLKVGFSGLWFGLLSAQLACAVSILYVVLARTDWEAEALKAEKLTRVEMGSCNEHRIIESEKDEECKRLLVNANINKDDIC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0907 508 TIGRFAM matE: MATE efflux family protein 34 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal9g0907 508 Pfam MatE 34 194 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal9g0907 508 Pfam MatE 261 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal9g0907 508 PANTHER PROTEIN DETOXIFICATION 13 482 - -
Lal9g0907 508 CDD MATE_eukaryotic 24 467 IPR045069 GO:0042910|GO:1990961
Lal9g0907 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0907 Lal-Chr9 6819022 6823451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0907 K03327 - gmx:100794753 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1026 2 7019830 7021608 Lal9g0907 9 6819022 6823451 LSH
Lal1g0896 1 6427847 6431449 Lal9g0907 9 6819022 6823451 LSH