Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0794 ATGGGGGCTGGTATTTCTTCAACTGCAACAGAAAATAGTGATGGAGGGTCTAGTCTTGGTGATATTCCAGAAAGTTGCATCTCTTTCTTACTCATGAATCTTGAACCTCAAGAAATTTGTAAATTGGCTAGAGTAAACAGAAATTTTCATAGAGCTTCTTCTGCTGATTTTGTATGGGAATCAAAGTTGACTCATAGCTACAAGTTTCTTATGAATAAAGTGATTGGTGTTGAAAAACTTGGAACCATGACTAAGAAAGAGATCTATGCTAAACTATGTCAACCCAATTTCTTTGATAATGGTACCAAAGAAGTTTGTTTGGATAGATGCAGTGGAAAAGCTTGTTTGTTCATTTCATCAAGGTCATTCAAGATAACAGGAATAGATGATAGAAGATATTGGAATTATATTCCTACTGAAGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAGGTACTAGGGGAGCTAGAATTTGAATTCCCAAAGGGCAATTACAGCATATTTTTCAGACTTCAATTGGGCAAAGCCTCAAAGAGATTGGGCCGGCGCGTGTGCAACATTGATCAAGTTCATGGTTGGGACATAAAGCCCGTCAGATTTCAACTATCTACATCGGACGGTCAGAATTCATTGTCTCAGTGTTATTTGCATACACCAGGAGAATGGGCTCACTACCATGTTGGAGATTTTGTCATTGATAAGCCCAATGGGCCTATAAGCATCAAGTTTTCTTTGGCCCAAATAGATTGCACACACACCAAAGGTGGTCTCTGCATAGATGGGGCAGTGATTTACCCAAAGGAGCTTGCAGAGAGATTTAAACAATTTTAG 849 0.3899 MGAGISSTATENSDGGSSLGDIPESCISFLLMNLEPQEICKLARVNRNFHRASSADFVWESKLTHSYKFLMNKVIGVEKLGTMTKKEIYAKLCQPNFFDNGTKEVCLDRCSGKACLFISSRSFKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVLGELEFEFPKGNYSIFFRLQLGKASKRLGRRVCNIDQVHGWDIKPVRFQLSTSDGQNSLSQCYLHTPGEWAHYHVGDFVIDKPNGPISIKFSLAQIDCTHTKGGLCIDGAVIYPKELAERFKQF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0794 282 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Lal9g0794 282 PANTHER F-BOX PROTEIN PP2-A15 1 282 - -
Lal9g0794 282 SUPERFAMILY F-box domain 7 92 IPR036047 GO:0005515
Lal9g0794 282 Pfam Phloem protein 2 113 272 IPR025886 -
Lal9g0794 282 PANTHER F-BOX PROTEIN 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0794 Lal-Chr9 5696949 5708111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0794 - - gmx:100787859 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0794 9 5696949 5708111 Lal9g0794 9 5696949 5708111 ECH
Lal2g0897 2 5942299 5945736 Lal9g0794 9 5696949 5708111 LSH
Lal9g0794 9 5696949 5708111 Lal12g0039 12 275388 278592 PCT
Lal12g0039 12 275388 278592 Lal9g0794 9 5696949 5708111 PCT