Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0039 ATGGGGGCTAATATTTCTTCAAATGAAAATACAATAGAAAATGACGATGGAGGGTCACTTTCACCATCATCAAGGTCTAGTCTTGGTGATATTCCAGAGAGTTGCATCTCTTATTTTTTGATGAATCTTGATCCACCCGATATATGCAAATTGGCTAGAGTCAACAGGACCTTTCACCGGGCTTCTTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCAACATGCTACAACTTTATTGTAAATAAAATTCTTAGGGAAGAAAATCTTGCTTCTATGAGTAAGAAAGAGATATATGCAAAGTTATGTCAACCCAATCGTTTTGATAGTGGTACCAAAGAAGTTTGGGTGGACAAATGCAGTGGACAGGTTTATTTATTAATGTCATCAAGGTCGTTGAAGATAACAGGAATACATGATCGAAGATATTGGAACTATATTCCAACTGAGGAGTCCAGGTTTAAGAATGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGGTTGGGGAGCTAGAGTTTGAGTTTCCTGTCGGGAGCTACAGCATATTTTTCAGACTCCAATTGGGCCAAGCACATAAAATATTGGGCCGACGTGTATGTAACGTTGATAGAGTTCACGGTTGGAACATCAAGCCCGTTCGATTTCAACTCTCCACATCGGACGGTCAACATTCATTTTCAGAGTTATACTTACGTGGGCCAGAAGAAGAGTGGGTCCATTACCATGTTGGAGATTTCGTGGTTGAGAAGCCCAATGAGCCAATAAAAGTGAAGTTTTCGTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGCCTCTGCCTAGATTATGCCATCATTTCCCCAATCCAATTTAGAGAAAGACTTTCACACAATTTTAACTAA 885 0.4011 MGANISSNENTIENDDGGSLSPSSRSSLGDIPESCISYFLMNLDPPDICKLARVNRTFHRASSADFVWESKLPTCYNFIVNKILREENLASMSKKEIYAKLCQPNRFDSGTKEVWVDKCSGQVYLLMSSRSLKITGIHDRRYWNYIPTEESRFKNVAYLQQMWWVEVVGELEFEFPVGSYSIFFRLQLGQAHKILGRRVCNVDRVHGWNIKPVRFQLSTSDGQHSFSELYLRGPEEEWVHYHVGDFVVEKPNEPIKVKFSLAQIDCTHTKGGLCLDYAIISPIQFRERLSHNFN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0039 294 Pfam Phloem protein 2 126 282 IPR025886 -
Lal12g0039 294 PANTHER F-BOX PROTEIN 1 290 - -
Lal12g0039 294 SUPERFAMILY F-box domain 20 99 IPR036047 GO:0005515
Lal12g0039 294 ProSiteProfiles F-box domain profile. 25 71 IPR001810 GO:0005515
Lal12g0039 294 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Lal12g0039 294 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0039 Lal-Chr12 275388 278592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0039 - - gmx:100795463 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0039 12 275388 278592 Lal12g0039 12 275388 278592 ECH
Lal2g0897 2 5942299 5945736 Lal12g0039 12 275388 278592 PCT
Lal9g0794 9 5696949 5708111 Lal12g0039 12 275388 278592 PCT
Lal12g0039 12 275388 278592 Lal2g0897 2 5942299 5945736 PCT
Lal12g0039 12 275388 278592 Lal9g0794 9 5696949 5708111 PCT