Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0778 ATGGCCCACTCTGCCCTCTCAGGTAAATCAAATGACAAGGAAACAAGTTCGCTGGTTGTTTCCTTTGGGGAAATGCTAATAGACTTTGTGCCAACCGAGACAGGAGTGTCACTTGCCGAAGCACCGGCTTTCAAGAAAGCTCCTGGTGGAGCTCCTGCCAATGTGGCTGTTGGTATTTCTAGACTGGGAGGTTCTAGTGCTTTTATAGGCAAGGTTGGAGCAGATGAATTTGGATATATGTTGGCAGACATCTTAAAGAAGAATGATGTTGACACATCTGGAATGCGGTTTGACTCTAATGCAAGAACTGCCTTAGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTTCGGAATCCTAGCGCTGATATGCTTCTTCACGAGTCAGAACTTGATATAAGTCTCATGAAGCAGGCTAAAATACTCCATTATGGTTCCATCAGCTTGATTGAGGAGCCATGCAGGTCAGCTCATCTTGCTGCTTTGAGCATTGCCAAAACCTCTGGTGCTATTCTCTCTTATGATCCAAATTTGAGATTGGCACTCTGGCCATCCGCTGAGGCCGCTCAGAAAGGCATAAATAGTATATGGGATCAAGCCGATATCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACTGGTGGTGATGATCCGAATGATGATAATGTTGTATTGAAGAAACTTTTTCATCCTAATCTCAAGCTTTTAATTGTTACTGAAGGGTCAAAGGGTTGTAGATACTACACGAAGGAATTTAGGGGCAGGGTTGCAGGTGTTAAAGTTAAACCTGTTGACACAACGGGTGCCGGAGATGCATTTGTTAGTGGGTTTCTCTACAGCATAGCTTCTGACCATAGTATTATTCAGGATGAGAAGCGTCTCCGAAAAGCTCTGTATTTTGCCAATGTATGCGGTGCCATCACCGTCACTGAGAGAGGTGCAATTCCTGCACTACCAACAAAGGAAGATGTGTTGCAATTCTTACTAGAAGCTGCCACAATATAG 1020 0.4353 MAHSALSGKSNDKETSSLVVSFGEMLIDFVPTETGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKKNDVDTSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDISLMKQAKILHYGSISLIEEPCRSAHLAALSIAKTSGAILSYDPNLRLALWPSAEAAQKGINSIWDQADIIKISEEEITFLTGGDDPNDDNVVLKKLFHPNLKLLIVTEGSKGCRYYTKEFRGRVAGVKVKPVDTTGAGDAFVSGFLYSIASDHSIIQDEKRLRKALYFANVCGAITVTERGAIPALPTKEDVLQFLLEAATI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0778 339 Pfam pfkB family carbohydrate kinase 18 325 IPR011611 -
Lal9g0778 339 CDD bac_FRK 18 320 - -
Lal9g0778 339 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 49 73 IPR002173 GO:0016773
Lal9g0778 339 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 270 283 IPR002173 GO:0016773
Lal9g0778 339 Gene3D - 15 338 IPR029056 -
Lal9g0778 339 PANTHER FRUCTOKINASE-7-RELATED 11 335 - -
Lal9g0778 339 SUPERFAMILY Ribokinase-like 19 333 IPR029056 -
Lal9g0778 339 PRINTS Ribokinase signature 44 63 IPR002139 GO:0016301
Lal9g0778 339 PRINTS Ribokinase signature 199 214 IPR002139 GO:0016301
Lal9g0778 339 PRINTS Ribokinase signature 241 252 IPR002139 GO:0016301
Lal9g0778 339 PANTHER HEXOKINASE FAMILY MEMBER 11 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0778 Lal-Chr9 5534846 5538328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0778 K00847 - gmx:100778752 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0778 9 5534846 5538328 Lal12g0027 12 222874 226093 PCT
Lal12g0027 12 222874 226093 Lal9g0778 9 5534846 5538328 PCT