Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0485 ATGCAGCAACACCATAACCCAACCACACTGGATTCCGACCCACATCTCCCCCAAATCAAAATCCACCACCCTTCCTCCCCTCACCACCACCCTTCCTCTGCTGCTACTCCCACTCCCACCGCCGGCGCTCGCCGTAAGATCGGTGTTGCCGTTGACCTTTCCGACGAGAGCGCCTACGCCGTCCGCTGGGCTGTCCAACAATACATCCGACCCGGCGATGCCGTCATCCTCCTCCACGTTAGCCCCACCAACGTCCTCTTCGGCGCCGATTGGGGCTCCATAGACCTATCCATCAATACCGATCCTAACACCGACGAGGAAACCGTCAACAGCGTCAACCACAGCGACCTCAGCAAGCGCAAGCTCGAGGATGATTTCGACGCCTTCACGGCGACGAAGTCCGCCGATCTTGCGAAACCGTTGAAAGATGCTCAGATTCCGTACAAGATCCACATTGTGAAAGATCACGACATGAAGGAGCGGTTGTGCCTCGAGGTCGAGAGGCTCGGACTCAGCGCCGTCATCATGGGGAGCCGAGGGTTTGGGGCCGTGCGCCGCGGTAGCGAGGGCAAGCTTGGGAGCGTTAGTGATTACTGTGTTCATCATTGTGTCTGTCCTGTGGTTGTTGTTCGCTATCCGGACGATAATGATAGCGTTGAAGTCGGTACTGGTGGTGCCGCCACCAGCGCTGTGGTGGTGGTCAAGGAGGGCGATGAGGGGGAGGCTGCGATCAAGCCTGTGGATGAACATAAAAAAGATGGTTGGGGCATTGGGCCATTGAGCACCAAAGAAACAAAGGATTCTGGTTTGGATTTTGTCATTCTTGAATCGGTTGGGCTAGCTTTTTCCCAAAGCTTGGCTCATGTCAGGGAGGTGCGTAATAAGGCAACTGCATCCACTGTGGTTGGTCTCAAGCATGAGTTGCTGAGTCTTCTATGGCTAACACTTATGAGCAAGTTGGCCTTGTCTGGAAATGGAGCCCCTGCCTGCTTTGGTCCCATTTTGTCATTTCTCTTCACTATTGTATCTGAACCAAAAGGAATAGTTGGAAATGGTGAAACAGTGCTCTCTTTTTCTTCGTGTCAGGTTGTACTTAGAGCATTTCCTGCGTATGAATTCTTGAAAGAATAA 1131 0.5314 MQQHHNPTTLDSDPHLPQIKIHHPSSPHHHPSSAATPTPTAGARRKIGVAVDLSDESAYAVRWAVQQYIRPGDAVILLHVSPTNVLFGADWGSIDLSINTDPNTDEETVNSVNHSDLSKRKLEDDFDAFTATKSADLAKPLKDAQIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAVRRGSEGKLGSVSDYCVHHCVCPVVVVRYPDDNDSVEVGTGGAATSAVVVVKEGDEGEAAIKPVDEHKKDGWGIGPLSTKETKDSGLDFVILESVGLAFSQSLAHVREVRNKATASTVVGLKHELLSLLWLTLMSKLALSGNGAPACFGPILSFLFTIVSEPKGIVGNGETVLSFSSCQVVLRAFPAYEFLKE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0485 376 MobiDBLite consensus disorder prediction 1 41 - -
Lal9g0485 376 Pfam Universal stress protein family 44 211 IPR006016 -
Lal9g0485 376 PANTHER UNIVERSAL STRESS PROTEIN PHOS32 4 243 - -
Lal9g0485 376 PANTHER OS01G0783500 PROTEIN 4 243 IPR044162 -
Lal9g0485 376 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 216 - -
Lal9g0485 376 Gene3D HUPs 36 221 IPR014729 -
Lal9g0485 376 PRINTS Universal stress protein signature 44 62 IPR006015 -
Lal9g0485 376 PRINTS Universal stress protein signature 189 211 IPR006015 -
Lal9g0485 376 CDD USP_Like 46 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0485 Lal-Chr9 3262322 3265537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0485 - - gmx:100805067 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0553 1 3572282 3574941 Lal9g0485 9 3262322 3265537 LSH
Lal2g0551 2 3322490 3324873 Lal9g0485 9 3262322 3265537 LSH