Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0553 ATGCAGTACCACCAGAACCCAACCACACTGGATTCCGACCCACAACTCCCCCAAATCAAAATCCACCACACTTCCTCCCCTCGCCACCACTCATCCTCCGCGGCTACTCCCACTCCAACCGCCGGTGCTCGCCGTAAGATCGGCGTCGCCGTCGACCTCTCCGACGAGAGCGCCTATGCCGTCCGCTGGGCGGTTCAGAACTATATCCGCCCTGGCGACGCCGTGATTCTCCTCCACGTCAGCCCCACCAACGTCCTATTCGGCGCCGATTGGGGCTCCATCGACCTCTCCATCAACACCAACCCTAACACGGACGAGGAAACCGTCAACAGCGTCAACCACAGCGACCTCAACAAACGCAAGCTCGAGGACGATTTCGACGCCTTCACGGCGACGAAGTTGGCCGATCTTGCTAAGCTTTTGAAAGATGCTCAGATTCCGTACAAAATCCACATCGTGAAAGATCACGACATGAAGGAGCGGTTGTGCCTTGAGGTTGAGAGACTCGGTCTCAGCGCCGTCATCATGGGGAGCCGAGGGTTTGGCGCTGTGCGCCGCGGCAGCGACGGTAAGCTCGGGAGCGTTAGTGATTACTGTGTTCATCATTGTGTCTGTCCAGTCGTAGTGGTTCGCTATCCGGACAGTGTTGAAATTGGTCCCGGTGGCGGTGCTGGTACCGCTGTGGTGGCGGTGAAAGAGAGCGATGAGGCCGAGGCCGTGACCAAGCCTGTGCTGGTAGCAGAAGAGCATAAGAAAGAATTGAATTTAGTTCAATTAATGCTCTATGGTAGTGTGTTCTTGAAGCAGAATGTATATGAACCAAAAAGAATAGTTGGAAATGGTTGTAGAGTGTTCTCTTTCTCTTCCTGTCAGGTTGTACTTAAAGCATTTCCTGATTATGAACTCCACAAAGATTAA 918 0.537 MQYHQNPTTLDSDPQLPQIKIHHTSSPRHHSSSAATPTPTAGARRKIGVAVDLSDESAYAVRWAVQNYIRPGDAVILLHVSPTNVLFGADWGSIDLSINTNPNTDEETVNSVNHSDLNKRKLEDDFDAFTATKLADLAKLLKDAQIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAVRRGSDGKLGSVSDYCVHHCVCPVVVVRYPDSVEIGPGGGAGTAVVAVKESDEAEAVTKPVLVAEEHKKELNLVQLMLYGSVFLKQNVYEPKRIVGNGCRVFSFSSCQVVLKAFPDYELHKD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0553 305 Gene3D HUPs 35 218 IPR014729 -
Lal1g0553 305 PRINTS Universal stress protein signature 44 62 IPR006015 -
Lal1g0553 305 PRINTS Universal stress protein signature 189 211 IPR006015 -
Lal1g0553 305 PANTHER OS01G0783500 PROTEIN 4 239 IPR044162 -
Lal1g0553 305 MobiDBLite consensus disorder prediction 23 43 - -
Lal1g0553 305 MobiDBLite consensus disorder prediction 23 39 - -
Lal1g0553 305 Pfam Universal stress protein family 44 211 IPR006016 -
Lal1g0553 305 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 213 - -
Lal1g0553 305 CDD USP_Like 46 198 - -
Lal1g0553 305 PANTHER UNIVERSAL STRESS PROTEIN PHOS32 4 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0553 Lal-Chr1 3572282 3574941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0553 - - gmx:100805067 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0553 1 3572282 3574941 Lal1g0553 1 3572282 3574941 ECH
Lal1g0553 1 3572282 3574941 Lal2g0551 2 3322490 3324873 LSH
Lal1g0553 1 3572282 3574941 Lal9g0485 9 3262322 3265537 LSH