Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0483 ATGGAACTAGATTATGGTTTTGGTTTCGAGGATTGTTTCCCATCCATGATTGCACGATTGGGTGCTGAAGGGTTTGTTGGTGAACTCTGCAACGGGTTTCGTTTGTTAATGGATGTGAACAAAGGCCTTATCACGTTCGAGAGTTTGAAGATAAATAGTTTGATGCTGGGTTTGGAAATGAGGGATGATGAGTTATTGTGCATGTTAATGGAAGGTGATTTGGATGGAGATGGAGCTCTAAGCCAAATGGAATTCTGCATTCTCATGTTTAGGTTGAGTCCTACTTTGATGGAACAAAGATTGTGA 306 0.4085 MELDYGFGFEDCFPSMIARLGAEGFVGELCNGFRLLMDVNKGLITFESLKINSLMLGLEMRDDELLCMLMEGDLDGDGALSQMEFCILMFRLSPTLMEQRL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0483 101 SUPERFAMILY EF-hand 26 99 IPR011992 -
Lal9g0483 101 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 5 99 - -
Lal9g0483 101 PANTHER CALCIUM-BINDING PROTEIN KIC 5 99 IPR044205 GO:0005509
Lal9g0483 101 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
Lal9g0483 101 Gene3D - 8 101 - -
Lal9g0483 101 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Lal9g0483 101 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0483 Lal-Chr9 3245413 3245718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0483 9 98 EF-hand Containing Proteins AT4G27280 61.957 3.10e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0483 K24345 - gmx:100795879 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0483 9 3245413 3245718 Lal9g0483 9 3245413 3245718 ECH
Lal11g1383 11 17343001 17343357 Lal9g0483 9 3245413 3245718 PCT
Lal9g0483 9 3245413 3245718 Lal11g1383 11 17343001 17343357 PCT