Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0468 ATGGAATCGATATTAGCAAGAGCTCTTGAGTACACACTCAAATACTGGCTCAAATCTTTCTCCAGAGACCAATTCAAGTTGCAGGGTCGCACCGCTCATCTCTCCAATTTAGATATTAATGGTGATGTATTGCATTCTAGTCTTGGTTTCCCACCTGCCCTCAATGTCTCTACTGCAAAAGTTGCCAAATTGGAGATTATGCTACCATCATCAGTGAGCAATGTACAAATAGAGCCGATTATTTTGAAAATTGATAGACTTGATTTGGTTCTTGAAGAGAATTCTGATTTTGATCCTGCTGACTCTCCAACCAGTTCGACTCCATCCAGTGCCTCCGCGAAGGGTAGCGGCTATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAAATTCATACAGTTAATCTATTACTTGAAACTCGTGGAAGTGGTCGCCAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATCACCATACGCAACCTTTTGCTGTATACCACAAATGAAAGCTGGCAGGTTGTAAATCTTAAGGAGGCACGGGAATTCTCCACTAATATGAAGTATATATATGTCTTCAAAAAACTGGAATGGGAATCTTTGTCTATTGATCTTCTGCCTCATCCTGACATGTTCACCGATGCTACTTTAGGCCGCTCTCAAGAAGGAGCAAACCTGAGAGATGATGATGGTGCAAAACGAGTATTCTTTGGAGGAGAGCGGTTTATAGAAGGAATATCGGGAGAAGCATATATCACGATTCAGAGAACTGAATTAAATAGTCCACTCGGGCTTGAGGTTCAGTTACATGTCACGGAAGCTGTTTGCCCTGCATTAAGTGAACCAGGACTACGTGCACTTCTCCGCTTTATGACAGGATTATATGTCTGTCTAAACAGGGGAGATGTAAATTCCAAGGCTCAGCAGCGAGTGACTGAATCTGCTGGTCGTTCTCTTGTCTCAATGATCGTGGACCATATATTTCTGTGCATTAAAGATTCTGAATTCCAGCTTGAGCTTTTAATGCAGTCCCTGTTTTTTTCTCGGGCCAGTCTCTGTGAAGGAGATGATGACAGCAACTTGACGAAGATTGCAATTGCAGGACTATTTTTGAGGGATACCTTTTCACGCCCTCCATGTACCTTAGTGCAACCATCAATGCAATCTGTCGCCGGAGATGCTTTCCAAGTGCCAAAATTTGCTAGAAGCTTTTGCCCCCCAATATATCCTCTTGGGGAACAGCAGTGGCAATTGATTGAGGGAACTCCTGTAATTTGCCTTCATTCCCTTCAAATCATGCCTTCTCCGCTTCCACCATCCTTTGCTTCTCAAACAGTTATCGACTGTCAGCCTCTTATGATTCATCTCCAGGAAGAATCCTGCCTGAGGATATCTTCTTTCTTAGCTGATGGTATTGTTATAAATCCTCGTGACATTTTACCAGATTCTTCAGTAAAATCTTTTAGTTTCTCTCTCAAGGGTCTGGATTTGACCGTTCCTTTGGATAAGGCCCAGTTGGATATTTCTAAAAGCAACATGGACAATACAGTCCAGACATCCTTTGCTGGTGCAAGGCTTCATATTGAAAACTTTTCCTTTCTGGATTCACCCTCTTTGAAACTAAGAATATTGAACCTGGAGAAGGATCCTGCTTGCTTCTGTCTGTGGGAAGGTCAACCGATTGATGCTAGCCAGAAGAAGTGGTCTGCCAGAGCATCCCAGATTACACTATCTCTTGAAGCATGTACTGGCACACTTGGGCGTCAGAGTTCCCTTGGATGGACTGCAGGATTGTGGAGATGTGTTGATCTAAAAGATACTTGCATTGAAGTTGCAATGGTAACTGCTGATGGTAGTCCATTGTTAAAGGTTCCTCCTCCAGGGGGGATTGTAAGGGTTGGTGTTGCTTGTGAACAGTTTCTATCCAACACATCTGTTGAACAGTTATTCTTTGTCTTGGATCTCTATTCTTATTTTGGTAGAGTTAGTGAGAAAATGATAATAGCAGGAAAAACGAAACAATTGAAGGATGTTAGGAACAAATCTTTTAGTGGAAACCTGATGGACAAGGTTCCTAGTGACACTTCTGTAAGTTTAGCAGTAAAAGACCTCCAACTTCGATTTCTTGAATCTTCTCCAGCCAGTGTTGAGGGAGCACCTCTAGTACAGTTTGTTGGTGACGATCTGTTCATTAGTGCCACTCATAGAACCCTTGGTGGCGCTGTTGTCGTTTCATCTTCTATACATTGGGAGAGCATTCAGGTTGATTGTGTGGATGCTGAGAGGCACTTGGCATGTGAAAATACCCCCTTGAGTTCTGGAGAAAATGTTCCCTCCTTGAATGATGATGGATACCCACAACTGAGAGCTGTTTTCTGGGTGAATAAGAAGAACCATATATTGAATGGAAATGCTCATTCAGTCCCTTTTCTCGACGTAACCACAGTTCATGTCATACCATTTTGTGAACTAGATATGGAGTCACATAGTTTGAATGTCTCAGCTTCTGTATCTGGTGTTCGTCTTGGTGGGGGGATGAACTATGCTGAAGCTCTCCTGCACCGATTTGGAATACTTGGGCCTGATGGTGGTCCTGGGAAGGATCTTTGTAAAGGGTTGGAAAACTTAAAATCTGGACCATTGGCTAAACTTTTTAAGACAACACCTCTCAATGATGATAGATCAGAAGATGTTGGAAGTATGACAGAAGGGAAAGAAACTGGTTTTCCACACTTGAAGAAGCCAGATAATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGTGCGCAAGAGATGGCTGAAAGTTGGTGGTTCTCCAGCCATGAAGATGTAAGAAGAGAAGAGAGGTTTTGGCACACAACTTTCCACACTTTACAATTAAATGCAAAAAGTAGTCCAAAGAAAGTTCCAGGTGAAAAAATACAACCACGAAGAATACAAGAATATGCTGTGGATCTGGTTACGGTTGGAGTTCAAGGGCTGCAGATCTTGAAGCCCCATACCCAAAAAGACATTAGTTCATCAATGTTAACTGAAAGTGGGGTTAAAGACTTTTCTGACGCAGTTGGGGGAATTGATCTTGAAGTGGGGTTGATATTATGTGAGGATAACATTGATGTTGAAATGGCTAATTGGGAAGTGGAAAACATAAAATTTGCCATTAAGCAACCGATTGAGGCTGTTGCAACCAAGGATGAGGTTCAACATCTTACTTTTCTATGCAAGTCTGAAGTTGATTCCGTAGGCCGGATAACGGCTGGAATTCTACGGCTGCTTAAGCTAGAAGGTTCAGTTGGCCAGTCTGTAATGGATCAGCTAGGTAACCTAGGAAGCAGTGGCATTGACAAGATTTTCACTCCTGAGAAGCTCAGAAGTGAAAGAAGCGAAAGTAGTGTCCATAGTGGAGGACATTCTCCCTTTTCAAACCTGATAAATGGAAGCCCACACAAAAGTATGGAACCAACATTGACTTTGCTTGAGGAAGAAGTTGTGGATTCACAGGCTAAGGTTAAATCTTTAATCACTGATATTGGTACTTCTGAGTCTTCTTTTCAGCACCTTACTGCTGTCAAACAACTCAGTGAAAAGATTGAGTCGATGCAGAGTTTATTGATGCAATTAAGGAACCAACTTTAA 3654 0.4228 MESILARALEYTLKYWLKSFSRDQFKLQGRTAHLSNLDINGDVLHSSLGFPPALNVSTAKVAKLEIMLPSSVSNVQIEPIILKIDRLDLVLEENSDFDPADSPTSSTPSSASAKGSGYGFADKIADGMTIQIHTVNLLLETRGSGRQGGATWAPPMASITIRNLLLYTTNESWQVVNLKEAREFSTNMKYIYVFKKLEWESLSIDLLPHPDMFTDATLGRSQEGANLRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHVTEAVCPALSEPGLRALLRFMTGLYVCLNRGDVNSKAQQRVTESAGRSLVSMIVDHIFLCIKDSEFQLELLMQSLFFSRASLCEGDDDSNLTKIAIAGLFLRDTFSRPPCTLVQPSMQSVAGDAFQVPKFARSFCPPIYPLGEQQWQLIEGTPVICLHSLQIMPSPLPPSFASQTVIDCQPLMIHLQEESCLRISSFLADGIVINPRDILPDSSVKSFSFSLKGLDLTVPLDKAQLDISKSNMDNTVQTSFAGARLHIENFSFLDSPSLKLRILNLEKDPACFCLWEGQPIDASQKKWSARASQITLSLEACTGTLGRQSSLGWTAGLWRCVDLKDTCIEVAMVTADGSPLLKVPPPGGIVRVGVACEQFLSNTSVEQLFFVLDLYSYFGRVSEKMIIAGKTKQLKDVRNKSFSGNLMDKVPSDTSVSLAVKDLQLRFLESSPASVEGAPLVQFVGDDLFISATHRTLGGAVVVSSSIHWESIQVDCVDAERHLACENTPLSSGENVPSLNDDGYPQLRAVFWVNKKNHILNGNAHSVPFLDVTTVHVIPFCELDMESHSLNVSASVSGVRLGGGMNYAEALLHRFGILGPDGGPGKDLCKGLENLKSGPLAKLFKTTPLNDDRSEDVGSMTEGKETGFPHLKKPDNVDVTIELRDWLFALEGAQEMAESWWFSSHEDVRREERFWHTTFHTLQLNAKSSPKKVPGEKIQPRRIQEYAVDLVTVGVQGLQILKPHTQKDISSSMLTESGVKDFSDAVGGIDLEVGLILCEDNIDVEMANWEVENIKFAIKQPIEAVATKDEVQHLTFLCKSEVDSVGRITAGILRLLKLEGSVGQSVMDQLGNLGSSGIDKIFTPEKLRSERSESSVHSGGHSPFSNLINGSPHKSMEPTLTLLEEEVVDSQAKVKSLITDIGTSESSFQHLTAVKQLSEKIESMQSLLMQLRNQL 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0468 1217 PANTHER UNCHARACTERIZED 1 1216 IPR026728 -
Lal9g0468 1217 MobiDBLite consensus disorder prediction 1131 1154 - -
Lal9g0468 1217 MobiDBLite consensus disorder prediction 1138 1154 - -
Lal9g0468 1217 Pfam N-terminal region of Chorein or VPS13 1 103 IPR026854 -
Lal9g0468 1217 MobiDBLite consensus disorder prediction 889 913 - -
Lal9g0468 1217 Coils Coil 1196 1217 - -
Lal9g0468 1217 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1216 - -
Lal9g0468 1217 MobiDBLite consensus disorder prediction 890 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0468 Lal-Chr9 3101591 3110746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0468 - - gmx:100811661 1846.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0468 9 3101591 3110746 Lal9g0468 9 3101591 3110746 ECH
Lal8g0862 8 6260725 6270009 Lal9g0468 9 3101591 3110746 PCT
Lal9g0468 9 3101591 3110746 Lal8g0862 8 6260725 6270009 PCT