Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0862 ATGGAGTCAATACTTGGTCGTGCTCTGGAATACACACTCAAGTATTGGCTCAAATCATTTTCTAGAGATCAATTCAAGTTACAGGGTCGAACCCTTCACCTTTCCAATTTAGATATAAACGGTGATGTGTTGCATTCCAGTGTTGGATTGCCACCTGCACTCAATGTTGCTACTGCCAAAGTTGGCAAATTGGAGATAATGCTTCCTTCGGTGAGTAATGTACAGATCGAACCAATTGTCGTGAAAATCGATAGACTTGATTTGGTTCTTGAGGAAAAATCTGATTTTGATGCACCATGTCCGAGTCCAAACAGTAACACGCCGTCGGCTGCCTCTTCAAAGGGTAGCGGTTATCGTTTTGCTGATAAGATTGCAGATGGCATGACTATAGAAGTTCATACAGTTAATCTATTACTTGAAACTCGCGGTAGTACCTCTCGCAAAGGGACAACTACATGGGCACCACCCATGGCATCTATCACCATGCGCAATCTTTTGCTGCGTACCACAAATGAAAATTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAGTTCTCCAATAACAAGAAGTACATATATGTCTTCAAAAAACTGGAATGGGAATCTTTGTGTATTGATCTGTTGCCTCATCCTGATATGTTCACGGATGCAGCATTTGACTGCTTTCAAGAGGGATCAAATCCAAGGGAAGATGATGGTGCAAAGCGATTATTCTTTGGAGGAGAGCGTTTTGTTGAAGGAATATCTGGAGAAGCATATATCACGGTTCAGAGAACTGAGTCCAACAGTCCACTCGGGCTTGAGGTTCAATTGCACATCAATGAAGCCGTTTGTCCTGCATTAAGTGAACCAGGACTACGTGCACTTCTCCGTTTCATGACAGGATTATACGTTTGTCTAAACAGGGGTGGTGTTGATTTCAAGGCTCAGCAGCGATCCACTGAAGCAGCTGGGCGCTCTCTTGTCTCAATTGTCGTAGATCATATATTTCTTTGCATTAAAGATACTGAATTCCAGCTTGAGCTTTTAATGCAGTCCCTCCTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATAATGACAACAACTTGACAAGGATTACAATTGGTGGACTATTTTTGAGGGACACCTTTTCAAACCCTCCATGCACCTTAGTGCAACCATCAATGAAACCTGTTTCAGGAGATGTTTTCCATGTTCCAGAATTTGCTAGGAGCTTTTTCCCTCCAATATACCCCTTGGGAGAACTGCAGTGGCAATTGATGAAGGGAACCCCTCTAATATGCCTCCACACCTTTCAGATCATGCCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACAGTTATTGAGTGTCAGCCTCTAATGATTCATCTCCGGGAAGAATCATGCCTGAGGATATCCTCTTTCTTAGGTGATGGAATTGTTGTCAGTCCTGGTGACATTTTACCTGATTTCTCAGTGAAATCTTTGATCTTCACTCTCATGGGACTGGACCTTACAGTTCCTTTTGACAATGTCAAAATGGACATTTCTAAGAGCAACATGGACAATACAACTCAGACCTCCTTCGCTGGCGCAAGGCTTCACGTTGAAAGCCTTTCCTTTTTGAACTCACCGTCATTGAGACTTAGAATGCTGAACCTGGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAAGGTCAACCAATTGATGCCAGCCAGAATAAGTGGACTGTTAGAGCATCCCAGCTGACTTTGTCTCTAGAAGCATGCACTGGCACAGCCGGAAATCAAAATTCTGCTGGAAGGACTGCAGAATTATTGAGATGTGTTGATCTGAAAGAGGCTTGCGTTGAAGTAGCTATGGCAACTGTTGATGGCAGTCCGTTGGTAAAAGTCCCTCCTCCAGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGAACAGTATATATCCAACACTTCTGTTGAACAGTTATTTTTTGTCCTGGATCTCTACGATTATTTTGGGAGAGTTAGTGAGAGAATAGCAATGGCTGGAAAAAGGAAACAATTGGAGGGCATTAGGGACAAATCTTATAGTGGAAAGATGATGGACAAGGTTCCTAGTGACACTGCTGTGAGTTTAGCAGTGAAAGACCTCCAACTTAGATTTCTAGAGTCTTCTTCAGCGAGTGTTGAGGGAATGCCTTTAGTACAGTTTGTTGGAGATGATCTGTTCATTAGTGCCAGTCATAAAACCCTTGGTGGTGCTATTTTTGTTTCATCTACTTTACGTTGGGAGAGTGTTGAGATAGACTGTGTGGATGCTGAGGGGCATTTAGCATGTGAAAAGGGCTCATTCTTGAGTTTTAGGGAAAATGTTCCCTCACCAAGTGATAACGGGTATCCTCAACTAAGAGCTGTTTTATGGGTGCATAAGAACGAGAAACATCTATTGAATGGAACTGCTCATTCAATCCCCTTTCTGGACATCAGGACGGTACATGTCATACCATTACATGAACAAGACACGGACTCTTATAGTTTGAATGTCTCAGCTTCTGTGTCTGGGGTCCGTCTTGGTGGAGGAATGAACTATGCTGAAGCCCTCTTGCATAAATTTGGAATACTTGGGCCTGATGGTCGCCCTGGGACAGAACTTTGTAAAGGGTTGGAAAACCTACAAAAAGGACCATTGTCAAAACTTTTTAAGACAACGCCTCTCATTATTGATAATTCAAATGATGTTGAAAGTACGAGAGAAGAGAATGAAACTGGGTTTCCACACTTGAAGAAGCCAGAAGATGTAGATATAACTATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGTGCACAAGATTCAGCTGAAAGATGGTGGTTCTCCAGTCATGAAGACGTAGGCAGAGAAGAGAGGTGTTGGCAAGCAACTTTCAATGGTTTACGAGTAAATGCGAAAACTGGCCCAAAGAATGTTACAGATCGAAAAGTACAAGTGCATAGAATACAAAAAAATAAAGTAGAACTCGTTACGGTTGGAGTTCAAGGGCTACGAATTTTGAAGCCTAATACCCAAAAAGACACTCCTTCATCAATGTTAATTGCAAATGGGGTTAAAGAATTTACTGACACAGTCGGTGGAATTGGTCTTGAAGCTCATTTGATATTATGTGAGGATAGTGTAGATGATGAAATGGCTAATTGGGAAGTCGAAAACCTAAAGTTCTCCGTTGAACAACCGATTGAGGCAGTTGTAACGAAGGACGAGCTTCAACGCCTCACTTTTCTTTGCAAATCTGAAATTGACTCAATTGGCCGGATAGCTGCTGGAATTATATGTCTGCTTAAGCTAGAAGGTTCTGTTGGTCAATCTGTAATAGATCAACTAGGCAACCTAGGAAGTGAAGGCATTGACAAGATTTTCTCTTCTGAAAAAGTCGGTCGAAACAGCAGTGTTGAGAGTAGAGGACTTTCTCCATTACCAAACCTGATAACTGAAGGACCAGACAAAACTAAAGAACAGACATTAACATTGCTTGAGGAAGCTGTTGTGGACTTGCAAGCTAAACTTAATGATTTGAACACTGATATTGGTACTTCAGAGTCTGTTTCCTTTCAGCATCTTACTGTCATCAAACTCGGTCGAAAGGTTGATACTATCCAAGGCTTATTGATGCAATTGAGGAATCAACTTTAA 3654 0.422 MESILGRALEYTLKYWLKSFSRDQFKLQGRTLHLSNLDINGDVLHSSVGLPPALNVATAKVGKLEIMLPSVSNVQIEPIVVKIDRLDLVLEEKSDFDAPCPSPNSNTPSAASSKGSGYRFADKIADGMTIEVHTVNLLLETRGSTSRKGTTTWAPPMASITMRNLLLRTTNENWQVVNLKEAREFSNNKKYIYVFKKLEWESLCIDLLPHPDMFTDAAFDCFQEGSNPREDDGAKRLFFGGERFVEGISGEAYITVQRTESNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGLYVCLNRGGVDFKAQQRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLMQSLLFSRASLSEGDNDNNLTRITIGGLFLRDTFSNPPCTLVQPSMKPVSGDVFHVPEFARSFFPPIYPLGELQWQLMKGTPLICLHTFQIMPSPLPPSFASQTVIECQPLMIHLREESCLRISSFLGDGIVVSPGDILPDFSVKSLIFTLMGLDLTVPFDNVKMDISKSNMDNTTQTSFAGARLHVESLSFLNSPSLRLRMLNLEKDPACFCLWEGQPIDASQNKWTVRASQLTLSLEACTGTAGNQNSAGRTAELLRCVDLKEACVEVAMATVDGSPLVKVPPPGGIVRVGVACEQYISNTSVEQLFFVLDLYDYFGRVSERIAMAGKRKQLEGIRDKSYSGKMMDKVPSDTAVSLAVKDLQLRFLESSSASVEGMPLVQFVGDDLFISASHKTLGGAIFVSSTLRWESVEIDCVDAEGHLACEKGSFLSFRENVPSPSDNGYPQLRAVLWVHKNEKHLLNGTAHSIPFLDIRTVHVIPLHEQDTDSYSLNVSASVSGVRLGGGMNYAEALLHKFGILGPDGRPGTELCKGLENLQKGPLSKLFKTTPLIIDNSNDVESTREENETGFPHLKKPEDVDITIELRDWLFALEGAQDSAERWWFSSHEDVGREERCWQATFNGLRVNAKTGPKNVTDRKVQVHRIQKNKVELVTVGVQGLRILKPNTQKDTPSSMLIANGVKEFTDTVGGIGLEAHLILCEDSVDDEMANWEVENLKFSVEQPIEAVVTKDELQRLTFLCKSEIDSIGRIAAGIICLLKLEGSVGQSVIDQLGNLGSEGIDKIFSSEKVGRNSSVESRGLSPLPNLITEGPDKTKEQTLTLLEEAVVDLQAKLNDLNTDIGTSESVSFQHLTVIKLGRKVDTIQGLLMQLRNQL 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0862 1217 Coils Coil 1162 1182 - -
Lal8g0862 1217 MobiDBLite consensus disorder prediction 96 116 - -
Lal8g0862 1217 Pfam N-terminal region of Chorein or VPS13 1 96 IPR026854 -
Lal8g0862 1217 MobiDBLite consensus disorder prediction 99 114 - -
Lal8g0862 1217 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1216 - -
Lal8g0862 1217 PANTHER UNCHARACTERIZED 1 1216 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0862 Lal-Chr8 6260725 6270009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0862 - - gmx:100803142 1917.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0862 8 6260725 6270009 Lal9g0468 9 3101591 3110746 PCT
Lal9g0468 9 3101591 3110746 Lal8g0862 8 6260725 6270009 PCT