Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0452 ATGGCTCCGGGCCATATAGTTGGAGGAGATGATGGAGACAGAGAGAAGAAGAGGTTCTTGGAGGGCAAGGTTTACACCCGAAGAAAGTTCAAAAGCACCAAGAAAGACCCTAGCTCCGTGAACACATTTACCACTGCCACTACAACTGTTGAAAATGACAGTGCCACCATTGCTGCCACCGCCAACATCGACTTTAACAACAATAGTGCTGTAAAGTGTGGTATCTCCGATAAGGCGAAGAGTAATAGCGATAACATTTCAGGTAGTATACTTACTGTTGCAGTGCCAGAGGATGGGAATTTGGCCCAGCCAAAAGTGAGTTCAGCAGAGGATAGGAATTCTGTTCAACCACAAGTGAATTCTGGAGAGGGTGAGAATTTGACTCAAACACAGGTGTGTTCGAGAGAGGATGAGAAATTGGCCCAGGAGCAAGTAAATTCAAGAGAGTATGATAACTTGGCTAAGCTTCCAGTGAATTCAACCTTAGATGATCAGGGTTCAGCTCAGCCACAAGCAGAATCAATGTTGGAGGATGGGAATTCGGATCAGCCAGAGGTGGATACAACATTGGGCGATAAGAATTCGGCTAAGCTACAAATGGACTCAACATTGGAGAAGGGGAATTCAGCTCAGACACTATTGGATTCAACATTGGTGGATGGTAATTCTGCCCAACCACAAGTTTACTCAACCTTGGAGGATGTGAGTTTGGTTTCGCCAGTTGCGAATTCAACATTGAATGATGGGAATTTGGCTGAACCGGCATTGAATTCAATATTGGAGGATAGAAGTTCAGCTCAGCCACAGGTAGATTCAACATTGGAGGATGGGACTTCAGCTCAGTGTATGGTGGTGCTGGTTTCTGATGACTCGTGCAGCCGTCAGCAGGATGATGATGGACCTTCGAGCCCCTACCATCGGCAGGATGCAGTTCCTATGACCCATGACCTGCCTTCCGTAAATGGGGCTGTCGAATTGCGGCAGGTTGACGATGGAACTTACAGCCCCAGCCATCAGCAGGAGATGATTCCTAGCTCTCAGGACATGCCTTCTGGCAATGGGGATGTGGAGCCGCAGCAGGCTGATGGTGGGCATTCAAGCCACAGCCATCAGCTGGACATGGTTCCTTGTACGCAAGTCCTGCCTTCAGGGAATGGGACTGTGGAGCCATGGATGGTTGACCCGATGAAGATCAGTTTGAACTCAAAGTCAAAGCAGGAGAAGCAGGAGCTAAGATGGAAGCTTGAGGAAGAGCTGAACGTCGTGAGAAGTTTGGTCAGGAGGATTGAAGTGAAACAGGGGCAAGCTGGAAGGTATGGTAATTTGAATGTGTCAATGGGTGGTGGAACTGGTAATGGGCGTAGAGCAATTCGTGTTCACTCAGAGGTGGCGTCTGCTGGCGTTCCACGAGAGTCTACAAGGCCTTTGCATCAGTTAAGTTTGTCAATGTTGGAGAATAGTCATGGGGTCAATGAAAATGTTGAGAGGGAGAAGAGAACACCTAAAGCAAATCAGTTTTATTGTAATTCAGAGTTCTTGCTTGCGAAAGATAAATTCCCACCTGTTGAGAGTAACAAGAAGTCAAAATTGCATTGGAAGAAGCAAGGTGGAGGAGAAATGGGACATCGTCTTGGGATGGGATCTAAGTTTTTCAAGAGCTGTAGTTCATTGCTTGAAAAGTTGATGAAACACAAGCATGGTTGGGTGTTTAACGCTCCTGTTGATGTTGAGGGTCTTGGTTTGCATGATTATTTTACTATCATCACACATCCGATGGACTTTGGTACTGTGAAGTCAAGACTGAGCAAGAATTGGTACAAATCACCAAAAGAGTTTGCAGAGGATGTGAGACTCACTTTTCGTAATGCCATGACATATAATCCTAAGGGACAAGATGTTCATGTAATGGCAGAGCAGCTATCAAAGATATTTGAAGAGAGGTGGGCTATAATCGAGTCTGATTACAATCGTGAGGTGAGATATGGCATAGAATATGGGGCAACTCCCAATGTACCTTCACCCTTGTCTAGAAAGGTTCCTGCTTTTCCTCCTGCACCTCTAGATATGAGAAGGATTTTGAATAGATCAGAACCAATGACACAAACTCCAAGACCCATGAGCATTACTCCATCAAGTAGAACCCCAGCTCCGAAGAAGCCTAAAGCAAAAGATCCTCATAAAAGGGACATGACATTTGAGGAAAAGCAAAAATTAAGTACAAACCTCCAGAGTTTACCTTCTGATAAGCTTGATGCTATTGTGCAAATCATCAAGAAGAGGAATTCAGCACTTCATCAACATGATGATGAAATTGAAGTTGACATTGATAGCGTGGATGCTGAGACTCTCTGGGAGCTTGATAGATTTGTAACCAATTATAAGAAAAGTTTGAGCAAAAACAAGAGAAAGGCAGAACTTGCTCGAGCTAGAGCAATTGCTGTGCAGAATGCCATCCAGAAGAGCCGGGCACCAGTTATGGTAGAGGTTCCAAGAGAAACACAAGCTGATGAAAGAAATGTTCCCCCACTCATGCCTGGGCATGGGGGAAATCTAGCAGATAATGGGAGTAGGTCAAGTAGTACAAGCAGCTCAAGCAGTGATTCTGGATCTTCTTCAAGTGATTCTGATAGTGACAGTTCATCCACATCTGGGTCTGATGAAGGGCCACAAAGGACCTGA 2679 0.4528 MAPGHIVGGDDGDREKKRFLEGKVYTRRKFKSTKKDPSSVNTFTTATTTVENDSATIAATANIDFNNNSAVKCGISDKAKSNSDNISGSILTVAVPEDGNLAQPKVSSAEDRNSVQPQVNSGEGENLTQTQVCSREDEKLAQEQVNSREYDNLAKLPVNSTLDDQGSAQPQAESMLEDGNSDQPEVDTTLGDKNSAKLQMDSTLEKGNSAQTLLDSTLVDGNSAQPQVYSTLEDVSLVSPVANSTLNDGNLAEPALNSILEDRSSAQPQVDSTLEDGTSAQCMVVLVSDDSCSRQQDDDGPSSPYHRQDAVPMTHDLPSVNGAVELRQVDDGTYSPSHQQEMIPSSQDMPSGNGDVEPQQADGGHSSHSHQLDMVPCTQVLPSGNGTVEPWMVDPMKISLNSKSKQEKQELRWKLEEELNVVRSLVRRIEVKQGQAGRYGNLNVSMGGGTGNGRRAIRVHSEVASAGVPRESTRPLHQLSLSMLENSHGVNENVEREKRTPKANQFYCNSEFLLAKDKFPPVESNKKSKLHWKKQGGGEMGHRLGMGSKFFKSCSSLLEKLMKHKHGWVFNAPVDVEGLGLHDYFTIITHPMDFGTVKSRLSKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVHVMAEQLSKIFEERWAIIESDYNREVRYGIEYGATPNVPSPLSRKVPAFPPAPLDMRRILNRSEPMTQTPRPMSITPSSRTPAPKKPKAKDPHKRDMTFEEKQKLSTNLQSLPSDKLDAIVQIIKKRNSALHQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELARARAIAVQNAIQKSRAPVMVEVPRETQADERNVPPLMPGHGGNLADNGSRSSSTSSSSSDSGSSSSDSDSDSSSTSGSDEGPQRT 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0452 892 Pfam Bromodomain 554 638 IPR001487 GO:0005515
Lal9g0452 892 PANTHER OSJNBA0053K19.4 PROTEIN 1 886 - -
Lal9g0452 892 CDD Bromo_plant1 551 648 IPR037377 -
Lal9g0452 892 Pfam Bromodomain extra-terminal - transcription regulation 730 791 IPR027353 -
Lal9g0452 892 MobiDBLite consensus disorder prediction 158 190 - -
Lal9g0452 892 MobiDBLite consensus disorder prediction 103 190 - -
Lal9g0452 892 ProSiteProfiles NET domain profile. 720 801 IPR027353 -
Lal9g0452 892 PANTHER TRANSCRIPTION FACTOR GTE4 1 886 - -
Lal9g0452 892 SUPERFAMILY Bromodomain 545 656 IPR036427 GO:0005515
Lal9g0452 892 SMART bromo_6 547 653 IPR001487 GO:0005515
Lal9g0452 892 MobiDBLite consensus disorder prediction 291 320 - -
Lal9g0452 892 ProSiteProfiles Bromodomain profile. 562 634 IPR001487 GO:0005515
Lal9g0452 892 MobiDBLite consensus disorder prediction 825 892 - -
Lal9g0452 892 PRINTS Bromodomain signature 565 578 IPR001487 GO:0005515
Lal9g0452 892 PRINTS Bromodomain signature 581 597 IPR001487 GO:0005515
Lal9g0452 892 PRINTS Bromodomain signature 597 615 IPR001487 GO:0005515
Lal9g0452 892 PRINTS Bromodomain signature 615 634 IPR001487 GO:0005515
Lal9g0452 892 MobiDBLite consensus disorder prediction 694 730 - -
Lal9g0452 892 MobiDBLite consensus disorder prediction 333 370 - -
Lal9g0452 892 Gene3D - 530 661 IPR036427 GO:0005515
Lal9g0452 892 MobiDBLite consensus disorder prediction 695 714 - -
Lal9g0452 892 MobiDBLite consensus disorder prediction 852 892 - -
Lal9g0452 892 MobiDBLite consensus disorder prediction 106 135 - -
Lal9g0452 892 Gene3D - 723 804 IPR038336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0452 Lal-Chr9 2966031 2971984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0452 - K11684 gmx:100817007 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0452 9 2966031 2971984 Lal9g0452 9 2966031 2971984 ECH
Lal8g0745 8 5325019 5333938 Lal9g0452 9 2966031 2971984 PCT