Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0745 ATGGCTTCGGAGTCTATAGAGAAACAGAGATACACAGAGAGTAAGGTTTACACGAGAAAAGCGTTTAAAAGCCCGAAGAGTAAAGCGAAGGCCTTAAACGCTGTCGTTCCTACCACGACGACAGTTACAACAACTAACAACGAAGATGAAAACAATACTGTTTCCGTCACTGCCATCACTACCACTGTTAATTTGGTTGAGAATAATGTGAAAAATGTTTCGGCTCGGCGAATGATACCGGTGGATGGGAATTCAGCTCAGCTGCAAGTAAATTCGAGGTTAGATGTGGTTTCTAATGTGCTGCCTGTGAAGCCAGTGTTGGATAATGGAGTTAAGATTAGCTTGGGGTTGGGGTCGAAGCAAGAGAAGCGGGAGCTAAGGAGGAAGCTTGAAAGGGAGCTTGATTTGGTGAGAAGATGGGTGAATAAGTTTGAAGATGGAAATTCAACTGTGTTGGTTGCATCCACTGGAGCTAAGGGTGCTCTTTCCGAGGTAGCATCTACTGTAGTTCTACGAGAACCTACCAGGGTTGCTGGTTTTCCACGAGATCCTAACAAGGCTTTTAACAAGTTGAGCATGCCCATATTAGAGAACAATCACGGGGTAAGCGGAAATGTTGAGAAGGAGAAGAGAACACCAAAGGCGAACCAGTTTTATCTCAATTCGGAGTTCTTGCTTGCTAAAGATAGATTTCCACCTGCAGAGAGTAACAAGAAGTCAAAATTGAGTGGGAAGAAGCGTGGTGGAGGAGAAATAGGAAATTGTTTTGGGACGGATTCAAAGTATTTCAAGAGCTGTAGCTCATTGCTTGAGAAGTTGATGAAACACAAACATGGTTGGGTGTTTAATACTCCAGTTGATGTTAAGGGTCTTGGTTTGCATGACTATTTAAGCATCATCACACATCCAATGGATTTAGGAACTGTGAATTCAAGGCTGAACAATAATTGGTACAATTCACCCAAAGAGTTTGCTGAGGATGTGAGGCTTACATTTCGTAATGCCATGACATATAATCCTAAAGGACAAGATGTTCATGTCATGGCAGAGCTGCTATCAAAGTTATTTGAGGAAAAATGGGCCATAGTAGAGTCAAATTACGACCGCAAGATGACATATGGCATAGATTACGGGGCAGCTACCCCTACACCTTCATCTTTGTCTAGAAAGGCTCACTCTGCTTTCCAGCCACCAGCTCGAACCCCTGCTCCAGAAAAGCCAAAATTAAGAGATCCTCTTAAAAGAGACATGACATATGAGGAAAAACAAAAACTTAGCGCAAACCTTCAGAATTTACCTTCTGAGAAGCTAGATGCAGTTGTGCAAATTATTAAGAGGAGCAACTCAGCACTTTCCCATAATGATGATGAAATTGAAGTGGATATTGATAGTGTGGATGTTGAGACTCTCTGGGAGCTTGATAGATTTGTGACCAACTATAAGAAAAGTTTGAGCAAACAAAAGAGGAAGGCTGAACTTGGTCTTCAACCTATAACACAAGCTGAGCAGAATTCCCCACATAAGAGTCAAACACCAGCTGTGGTTGAGCTTATGAAAGAAAAACAAGCAGATGGAAGAAATGATCTCCTATCCTTGCCTTCGCAAGTGGAAATTCAAGTGAATAATGGGAGCAAGTCTAGTAGTTCAAGCAGTGTTTCTGGCCCTTCCTCAAGTGATTCTGATAGTGATAGTTCCTCAGCCTCTGGGTCTGACGCAGCTTAA 1722 0.4245 MASESIEKQRYTESKVYTRKAFKSPKSKAKALNAVVPTTTTVTTTNNEDENNTVSVTAITTTVNLVENNVKNVSARRMIPVDGNSAQLQVNSRLDVVSNVLPVKPVLDNGVKISLGLGSKQEKRELRRKLERELDLVRRWVNKFEDGNSTVLVASTGAKGALSEVASTVVLREPTRVAGFPRDPNKAFNKLSMPILENNHGVSGNVEKEKRTPKANQFYLNSEFLLAKDRFPPAESNKKSKLSGKKRGGGEIGNCFGTDSKYFKSCSSLLEKLMKHKHGWVFNTPVDVKGLGLHDYLSIITHPMDLGTVNSRLNNNWYNSPKEFAEDVRLTFRNAMTYNPKGQDVHVMAELLSKLFEEKWAIVESNYDRKMTYGIDYGAATPTPSSLSRKAHSAFQPPARTPAPEKPKLRDPLKRDMTYEEKQKLSANLQNLPSEKLDAVVQIIKRSNSALSHNDDEIEVDIDSVDVETLWELDRFVTNYKKSLSKQKRKAELGLQPITQAEQNSPHKSQTPAVVELMKEKQADGRNDLLSLPSQVEIQVNNGSKSSSSSSVSGPSSSDSDSDSSSASGSDAA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0745 573 MobiDBLite consensus disorder prediction 383 412 - -
Lal8g0745 573 Pfam Bromodomain 266 350 IPR001487 GO:0005515
Lal8g0745 573 MobiDBLite consensus disorder prediction 519 573 - -
Lal8g0745 573 PANTHER OSJNBA0053K19.4 PROTEIN 2 572 - -
Lal8g0745 573 MobiDBLite consensus disorder prediction 528 573 - -
Lal8g0745 573 Coils Coil 123 143 - -
Lal8g0745 573 Pfam Bromodomain extra-terminal - transcription regulation 417 478 IPR027353 -
Lal8g0745 573 ProSiteProfiles Bromodomain profile. 274 346 IPR001487 GO:0005515
Lal8g0745 573 SMART bromo_6 259 365 IPR001487 GO:0005515
Lal8g0745 573 PANTHER TRANSCRIPTION FACTOR GTE4 2 572 - -
Lal8g0745 573 SUPERFAMILY Bromodomain 257 367 IPR036427 GO:0005515
Lal8g0745 573 Gene3D - 411 491 IPR038336 -
Lal8g0745 573 PRINTS Bromodomain signature 277 290 IPR001487 GO:0005515
Lal8g0745 573 PRINTS Bromodomain signature 293 309 IPR001487 GO:0005515
Lal8g0745 573 PRINTS Bromodomain signature 309 327 IPR001487 GO:0005515
Lal8g0745 573 PRINTS Bromodomain signature 327 346 IPR001487 GO:0005515
Lal8g0745 573 ProSiteProfiles NET domain profile. 407 488 IPR027353 -
Lal8g0745 573 CDD Bromo_plant1 263 360 IPR037377 -
Lal8g0745 573 Gene3D - 253 373 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0745 Lal-Chr8 5325019 5333938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0745 - - aprc:113855316 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0745 8 5325019 5333938 Lal8g0745 8 5325019 5333938 ECH
Lal8g0745 8 5325019 5333938 Lal9g0452 9 2966031 2971984 PCT