Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0405 ATGGTAGGTGACCTGTCTTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCAGGTGCAGCAGCATCAGGTGCATTGACATCTGCTTTGAGGTTGATCACAAAAGCAGCATTTGAGAATTCTAAGGATAGTCTTCGCAAAGGAGCCATTCTGTTCTTTACCATATCAACATTCTTTGAGCTTCTTTGTGTTCTTCTGTATGCGTTTGTCTTTCCTAAATTGCCAATTGTGAAGTATTACCGTTCAAAAGCGGCATCAGAAGGATCCAAAACTGTCACAGGTGACCTTGCAGCCGGTGGCATCCAGACATCACTTACAAGAGTAGTTGATGAAGATGCAAAACAAGAGCGCAAAGGAAACAAGCAATTGTTATGGGAAAACATTGATTATGCACTCCTAATATATACACTAACACTGTCTATATTCCCTGGATTCCTATCAGAAGATACAGGATCACACAGTTTGGGCACATGGTATGCTCTTGTTTTAATTGCAATGTATAATGTATTTGATTTGATGGGGAGATACGTTCCACTTGTGAAATTGTTGAAGTTGGAGTCTAGAAAATTGATCACAGCAACAATTCTTTGCCGTTTTGTACTTATACCAGCATTTTATTTCACTGCAAAGTATGGTAGTCAGGGTTGGATGATATTCTTGACATCTTTCTTGGGGTTATCCAATGGCTACCTCACTGTCTGTGTTCTCACAAGTGCACCCAAAGGCTACAAGGGACCAGAACAAAATGCTTTGGGAAACATGTTGGTGTTGTTTCTACTTGGAGGTATTTTTGCAGGTGTAACACTTGACTGGTTGTGGTTGATAGGTAAAGGCTGGTGA 840 0.406 MVGDLSYMLPEFIQSFLAGAAASGALTSALRLITKAAFENSKDSLRKGAILFFTISTFFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVTGDLAAGGIQTSLTRVVDEDAKQERKGNKQLLWENIDYALLIYTLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVFDLMGRYVPLVKLLKLESRKLITATILCRFVLIPAFYFTAKYGSQGWMIFLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNMLVLFLLGGIFAGVTLDWLWLIGKGW 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0405 279 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 1 278 IPR030200 -
Lal9g0405 279 SUPERFAMILY MFS general substrate transporter 45 272 IPR036259 -
Lal9g0405 279 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 1 278 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal9g0405 279 Pfam Nucleoside transporter 3 273 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0405 Lal-Chr9 2690312 2693232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0405 1 277 Organic Solute Cotransporters AT4G05120 71.786 2.89e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0405 K15014 - gmx:100798899 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0405 9 2690312 2693232 Lal9g0405 9 2690312 2693232 ECH
Lal1g0483 1 3037559 3040138 Lal9g0405 9 2690312 2693232 LSH
Lal8g0821 8 5885953 5889779 Lal9g0405 9 2690312 2693232 PCT
Lal9g0405 9 2690312 2693232 Lal8g0821 8 5885953 5889779 PCT