Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0483 ATGGTGGACAATGAGCCTTCACCACGAGTTGAGGGAAAGTTTGCTGCAATTGTAGTATGCTGGCTTCTTGGCAATGGGTGTCTTTTCTCATGGAACAGCATGCTGACAATTGAAGATTACTACGTTGAATTGTTCCCGAAATACCACCCCTCTAGGGTGCTTACTCTTGTATATCAGCCCTTTGCAGTTGGAACACTAGCAATACTGGCTTACAAAGAGGCCAAAATCAATACTAGAATACGAAACCTATTTGGATATACTCTTTTTTTCATAGCCACTTTGTTGGTATTAGTTTTGGATTTAGCAACATCTGGTAGAGGAGGAATTGGAACTTTCATTGGTATATGTATAATTAGTGGTGCATTTGGAATAGCAGATGCTCATGCACAAGGTGGAATGGTTGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTGCAGCAGCATCAGGTGCATTAACATCTTGTTTGAGGTTAATCACAAAAGCAGCATTTGAGAATTCTAAGGACGGTCTTCGCAAAGGAGCCATTCTGTTCTTTGCTATATCAACATTCTTTGAGCTTCTTTGTGTTCTTCTCTACGCATTTGTCTTTCCAAAATTGCCAATCATCAAATATTACCGATCAAAAGCGGCATCAGAAGGATCGAAAACTGTCACAGGTGACCTTGCAGCTGGTGGCATTCAGACCTCACATACAGGAGACAATGCAGAAGCAAAACAAGAGCGCAAAGGAAAAAAGCAATTGTTATATGAAAACATTGATTATGCACTTGATTTGTTCCTAATATACGCGCTGACACTCTCTATTTTCCCTGGATTTCTATCAGAAGATACAGGAAAACACAGTTTAGGCACCTGGTATGCTCTTGTTTTAATTACAATGTATAATGTATTTGATTTGATTGGGAGATACGTTCCACTCTTAAAAATGGTGAAGTTGGAGTCAAGAAAATTGATCACAATAGCAATTCTTTGTCGATTTCTACTTGTACCAGCATTTTATTTTACTGCAAAATATGGTGATCAGGGTTGGATGATATTATTGACATCTTTCTTGGGTTTAACCAATGGCTACCTCACTGTTTGTGTTCTCACAAGTGCACCCAAAGGTTACAAGGGACCAGAACAGAATGCCTTGGGAAATCTATTGGTGTTGTTTCTACTTGGAGGTATTTTTGCAGGTGTAACACTTGATTGGTTATGGTTAATAGGTAAAGGGTGGTGA 1242 0.3953 MVDNEPSPRVEGKFAAIVVCWLLGNGCLFSWNSMLTIEDYYVELFPKYHPSRVLTLVYQPFAVGTLAILAYKEAKINTRIRNLFGYTLFFIATLLVLVLDLATSGRGGIGTFIGICIISGAFGIADAHAQGGMVGDLSYMLPEFIQSFLAGAAASGALTSCLRLITKAAFENSKDGLRKGAILFFAISTFFELLCVLLYAFVFPKLPIIKYYRSKAASEGSKTVTGDLAAGGIQTSHTGDNAEAKQERKGKKQLLYENIDYALDLFLIYALTLSIFPGFLSEDTGKHSLGTWYALVLITMYNVFDLIGRYVPLLKMVKLESRKLITIAILCRFLLVPAFYFTAKYGDQGWMILLTSFLGLTNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0483 413 PIRSF ENT 3 411 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0483 413 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 4 412 IPR030200 -
Lal1g0483 413 Pfam Nucleoside transporter 124 407 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lal1g0483 413 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4 412 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0483 Lal-Chr1 3037559 3040138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0483 3 411 Organic Solute Cotransporters AT4G05120 70.171 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0483 K15014 - gmx:100798899 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0483 1 3037559 3040138 Lal9g0405 9 2690312 2693232 LSH
Lal8g0821 8 5885953 5889779 Lal1g0483 1 3037559 3040138 PCT
Lal1g0483 1 3037559 3040138 Lal8g0821 8 5885953 5889779 PCT