Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0386 ATGTCCCAGTTTTGCCGAGAAACTGGTCACTCCACCACCCTGCGACGGCGATTTGAGCACCGTGTCTCGGTGATACGGCGATGTCTCCTCCGCGTTATCCACCGTTTCATGATCTGCTCTGGAAGCAAGGGTACTAATGACACGTGCCGCATGCTGTCTCCGCATGCAGGATTGTCTACTCCGTCGCCGCCGATGGCTTTCTCCGATGATGCTAGCCCTGAAGCGTTTCCGATTCCATTGTCTCCGTCCGTGTTTCATACCCATGTCTTGGATTCTGATTTAGTTTCATTGAAGATCACTTTGTTGGGTGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGAAAAAGATCAGCAAGGGCGACAGGGGAAAGGGCTAAACCAAATGGACAAGATTTTGGATGTAAGAGGAGCACGAATATCGTATTGTATTTGGGAAGTACAAGGTGATGGAAAATCAGAAGAACAAATTGCAATGGCTTGCAAGGACTCGGTAGCAATTTTGATTATGTTTGATCTAACGAGTCGATGCACATTAAACAGTGTCCTTGGATGGTACAAAGAAGCAAGGAAATGGAATCAGACAGCAATTCCAGTGTTGATAGGTACCAAGTTTGATGATTTCATTCAGCTCCCAATTGATTTGCAATGGACCATCGCCAGTGAGGCGAGAGCATATGCAAAGGCCCTGAATGCAACGTTATTCTTTTCAAGTGCAAATTACAACATCAACGTGAACAAGATCTTCAAGTTCATAACTGCAAAACTCTTCGACCTACCATGGACAGTGGAAAGAAATCTAACAGTTGGAGAACCAATTATTGATTTCTAA 846 0.4456 MSQFCRETGHSTTLRRRFEHRVSVIRRCLLRVIHRFMICSGSKGTNDTCRMLSPHAGLSTPSPPMAFSDDASPEAFPIPLSPSVFHTHVLDSDLVSLKITLLGDCQIGKTSFLVKYVGDEKDQQGRQGKGLNQMDKILDVRGARISYCIWEVQGDGKSEEQIAMACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASEARAYAKALNATLFFSSANYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0386 281 ProSiteProfiles small GTPase Rab1 family profile. 91 281 - -
Lal9g0386 281 Gene3D - 91 271 IPR027417 -
Lal9g0386 281 PANTHER - 71 280 - -
Lal9g0386 281 SMART rab_sub_5 97 264 - -
Lal9g0386 281 PANTHER MONOMERIC G-PROTEIN 71 280 - -
Lal9g0386 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 272 IPR027417 -
Lal9g0386 281 SMART rho_sub_3 99 263 IPR001806 GO:0003924|GO:0005525
Lal9g0386 281 PRINTS Transforming protein P21 ras signature 97 118 - -
Lal9g0386 281 PRINTS Transforming protein P21 ras signature 138 160 - -
Lal9g0386 281 PRINTS Transforming protein P21 ras signature 199 212 - -
Lal9g0386 281 PRINTS Transforming protein P21 ras signature 239 261 - -
Lal9g0386 281 Pfam Ras family 98 261 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0386 Lal-Chr9 2553429 2557664 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0386 K07976 - gmx:100780638 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0386 9 2553429 2557664 Lal9g0386 9 2553429 2557664 ECH
Lal1g0493 1 3119449 3122420 Lal9g0386 9 2553429 2557664 LSH